Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MDGA1
  • Mouse genes Mdga1
  • Rat genes Mdga1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mdga1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0005615	extracellular space	MDGA1	HDA		Human	PMID:22664934
Cellular Component	GO:0098982	GABA-ergic synapse	MDGA1	IDA		Human	PMID:28641112
Cellular Component	GO:0098982	GABA-ergic synapse	MDGA1	IMP		Human	PMID:28641112
Cellular Component	GO:0005794	Golgi apparatus	MDGA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	MDGA1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	MDGA1	IDA		Human	PMID:15922729
Cellular Component	GO:0005886	plasma membrane	Mdga1	IDA		Rat	PMID:15019943|RGD:8554528
Biological Process	GO:0007420	brain development	Mdga1	IEP		Rat	PMID:15019943|RGD:8554528
Biological Process	GO:0021799	cerebral cortex radially oriented cell migration	Mdga1	IMP	MGI:MGI:4878863	Mouse	PMID:21104742
Biological Process	GO:0051964	negative regulation of synapse assembly	Mdga1	IDA		Rat	PMID:23358245|RGD:9743980
Biological Process	GO:0001764	neuron migration	Mdga1	IDA		Mouse	MGI:MGI:3623849|PMID:16641224
Biological Process	GO:0001764	neuron migration	Mdga1	IMP	MGI:MGI:4878863	Mouse	PMID:20473291
Biological Process	GO:1905606	regulation of presynapse assembly	MDGA1	IDA		Human	PMID:28641112
Biological Process	GO:1905606	regulation of presynapse assembly	MDGA1	IMP		Human	PMID:28641112
Biological Process	GO:0099179	regulation of synaptic membrane adhesion	MDGA1	IDA		Human	PMID:28641112
Biological Process	GO:0099179	regulation of synaptic membrane adhesion	MDGA1	IMP		Human	PMID:28641112
Biological Process	GO:0021527	spinal cord association neuron differentiation	Mdga1	IEP		Rat	PMID:15019943|RGD:8554528

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern