Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MGP
  • Mouse genes Mgp
  • Rat genes Mgp
  • Zfish genes mgp
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mgp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	Mgp	IDA		Rat	PMID:12871556|RGD:1600787
Molecular Function	GO:0048306	calcium-dependent protein binding	Mgp	IPI	RGD:2211	Rat	PMID:12871556|RGD:1600787
Molecular Function	GO:0005515	protein binding	MGP	IPI	UniProtKB:P27958:PRO_0000037576	Human	PMID:15607035
Cellular Component	GO:0062023	collagen-containing extracellular matrix	MGP	HDA		Human	PMID:20551380
Cellular Component	GO:0062023	collagen-containing extracellular matrix	MGP	HDA		Human	PMID:23979707
Cellular Component	GO:0062023	collagen-containing extracellular matrix	MGP	HDA		Human	PMID:27068509
Cellular Component	GO:0062023	collagen-containing extracellular matrix	MGP	HDA		Human	PMID:27559042
Cellular Component	GO:0062023	collagen-containing extracellular matrix	Mgp	IDA		Rat	PMID:11716499|RGD:2293597
Cellular Component	GO:0005783	endoplasmic reticulum	Mgp	IDA		Rat	PMID:10613667|RGD:1582510
Cellular Component	GO:0070062	extracellular exosome	MGP	HDA		Human	PMID:19199708
Cellular Component	GO:0005615	extracellular space	Mgp	IDA		Rat	PMID:12676928|RGD:1582508
Cellular Component	GO:0032991	protein-containing complex	Mgp	IDA		Rat	PMID:12676928|RGD:1582508
Cellular Component	GO:0032991	protein-containing complex	Mgp	IDA		Rat	PMID:12871556|RGD:1600787
Biological Process	GO:0048754	branching morphogenesis of an epithelial tube	Mgp	IMP		Rat	PMID:15136295|RGD:1582506
Biological Process	GO:0030324	lung development	Mgp	IMP		Rat	PMID:15136295|RGD:1582506
Biological Process	GO:0001503	ossification	Mgp	IEP		Rat	PMID:9718189|RGD:1582512
Biological Process	GO:0065003	protein-containing complex assembly	Mgp	IPI	RGD:2075|RGD:3305|RGD:708488|RGD:68322|ChEBI:35156|ChEBI:26020	Rat	PMID:12676928|RGD:1582508
Biological Process	GO:0051592	response to calcium ion	Mgp	IEP		Rat	PMID:11062022|RGD:1582509
Biological Process	GO:0051384	response to glucocorticoid	Mgp	IEP		Rat	PMID:12754193|RGD:1582507
Biological Process	GO:0009725	response to hormone	Mgp	IEP		Rat	PMID:16100044|RGD:1582505
Biological Process	GO:0009612	response to mechanical stimulus	Mgp	IEP		Rat	PMID:9718189|RGD:1582512
Biological Process	GO:0007584	response to nutrient	Mgp	IEP		Rat	PMID:1757478|RGD:1582514
Biological Process	GO:0010033	response to organic substance	Mgp	IEP		Rat	PMID:10460895|RGD:1582511

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern