Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MINDY2
  • Mouse genes Mindy2
  • Rat genes Mindy2
  • Zfish genes mindy2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mindy2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016807	cysteine-type carboxypeptidase activity	MINDY2	IDA		Human	PMID:27292798
Molecular Function	GO:0071795	K11-linked polyubiquitin modification-dependent protein binding	MINDY2	IDA		Human	PMID:28082312
Molecular Function	GO:1990380	K48-linked deubiquitinase activity	MINDY2	IDA		Human	PMID:27292798
Molecular Function	GO:0036435	K48-linked polyubiquitin modification-dependent protein binding	MINDY2	IDA		Human	PMID:28082312
Molecular Function	GO:0071796	K6-linked polyubiquitin modification-dependent protein binding	MINDY2	IDA		Human	PMID:28082312
Molecular Function	GO:0070530	K63-linked polyubiquitin modification-dependent protein binding	MINDY2	IDA		Human	PMID:28082312
Cellular Component	GO:0005654	nucleoplasm	MINDY2	IDA		Human	GO_REF:0000052

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern