Comparative GO Graph (mouse, human)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MIR539
  • Mouse genes Mir539
  • Rat genes
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mir539

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003723	RNA binding	Mir539	IDA		Mouse	PMID:24710105
Cellular Component	GO:0005737	cytoplasm	Mir539	IDA		Mouse	PMID:24710105
Cellular Component	GO:0005634	nucleus	Mir539	IDA		Mouse	PMID:24710105
Biological Process	GO:0044237	cellular metabolic process	Mir539	IMP		Mouse	PMID:25124681
Biological Process	GO:1990830	cellular response to leukemia inhibitory factor	Mir539	IEP		Mouse	PMID:20439489
Biological Process	GO:0071234	cellular response to phenylalanine	Mir539	IEP		Mouse	PMID:26822703
Biological Process	GO:0097009	energy homeostasis	Mir539	IMP		Mouse	PMID:25124681
Biological Process	GO:0060291	long-term synaptic potentiation	Mir539	IEP		Mouse	PMID:25858512
Biological Process	GO:0010629	negative regulation of gene expression	Mir539	IMP		Mouse	PMID:24710105
Biological Process	GO:0090140	regulation of mitochondrial fission	Mir539	IMP		Mouse	PMID:24710105

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern