Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MMD
  • Mouse genes Mmd
  • Rat genes Mmd
  • Zfish genes mmd
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mmd

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:P01350	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:P11836	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:P78329	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q3SXY8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q53GL0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q5JX71	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q69YG0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q6RW13-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q8TDT2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q8TED1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q8WVX3-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q969S6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q96EC8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q9BV81	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q9H2L4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q9H9B4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q9HD20-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q9NX40	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MMD	IPI	UniProtKB:Q9Y6D0	Human	PMID:32296183
Molecular Function	GO:0004672	protein kinase activity	MMD	IDA		Human	PMID:21968647
Cellular Component	GO:0005794	Golgi apparatus	MMD	IDA		Human	PMID:21968647
Biological Process	GO:0036302	atrioventricular canal development	mmd	IMP	ZFIN:ZDB-MRPHLNO-130115-4	Zfish	PMID:22814753
Biological Process	GO:0003272	endocardial cushion formation	mmd	IMP	ZFIN:ZDB-MRPHLNO-130115-4	Zfish	PMID:22814753
Biological Process	GO:0003007	heart morphogenesis	mmd	IGI	ZFIN:ZDB-MRPHLNO-130115-2,ZFIN:ZDB-MRPHLNO-130115-4	Zfish	PMID:22814753
Biological Process	GO:0003007	heart morphogenesis	mmd	IMP	ZFIN:ZDB-MRPHLNO-130115-5	Zfish	PMID:22814753
Biological Process	GO:0003007	heart morphogenesis	mmd	IMP	ZFIN:ZDB-MRPHLNO-130115-4	Zfish	PMID:22814753
Biological Process	GO:0045666	positive regulation of neuron differentiation	MMD	IDA		Human	PMID:21968647
Biological Process	GO:0045860	positive regulation of protein kinase activity	MMD	IDA		Human	PMID:21968647
Biological Process	GO:0032880	regulation of protein localization	MMD	IDA		Human	PMID:21968647
Biological Process	GO:0046578	regulation of Ras protein signal transduction	mmd	IMP	ZFIN:ZDB-MRPHLNO-130115-4	Zfish	PMID:22814753

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern