Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MMP23B
  • Mouse genes Mmp23
  • Rat genes Mmp23
  • Zfish genes mmp23ba,mmp23bb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mmp23

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004222	metalloendopeptidase activity	MMP23B	IDA		Human	PMID:9988691
Cellular Component	GO:0062023	collagen-containing extracellular matrix	MMP23B	HDA		Human	PMID:28344315
Biological Process	GO:0001889	liver development	mmp23bb	IMP	ZFIN:ZDB-MRPHLNO-110301-3	Zfish	PMID:21064033
Biological Process	GO:0001889	liver development	mmp23bb	IMP	ZFIN:ZDB-MRPHLNO-110301-4	Zfish	PMID:21064033
Biological Process	GO:0006508	proteolysis	MMP23B	IDA		Human	PMID:9988691
Biological Process	GO:0000003	reproduction	MMP23B	IEP		Human	PMID:9988691

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern