Comparative GO Graph (mouse, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes
  • Mouse genes Mptx2
  • Rat genes Mptx1
  • Zfish genes crp1,crp2,crp6,crp7
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mptx2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015485	cholesterol binding	crp7	IDA		Zfish	PMID:30653529
Molecular Function	GO:0015485	cholesterol binding	crp2	IDA		Zfish	PMID:30653529
Molecular Function	GO:0008142	oxysterol binding	crp7	IDA		Zfish	PMID:30653529
Biological Process	GO:0051607	defense response to virus	crp6	IDA		Zfish	PMID:28915434
Biological Process	GO:0051607	defense response to virus	crp1	IDA		Zfish	PMID:28915434
Biological Process	GO:0051607	defense response to virus	crp7	IDA		Zfish	PMID:28915434
Biological Process	GO:0051607	defense response to virus	crp2	IDA		Zfish	PMID:28915434
Biological Process	GO:0009617	response to bacterium	crp2	IDA		Zfish	PMID:16630661

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern