Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MREG
  • Mouse genes Mreg
  • Rat genes Mreg
  • Zfish genes zgc:91968
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Mreg

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0035091	phosphatidylinositol binding	Mreg	IDA		Mouse	MGI:MGI:3848102|PMID:19240024
Molecular Function	GO:0005515	protein binding	MREG	IPI	UniProtKB:Q8N9N8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Mreg	IPI	PR:Q5ND29	Mouse	PMID:23523350
Molecular Function	GO:0005515	protein binding	Mreg	IPI	PR:O08788	Mouse	PMID:23523350
Cellular Component	GO:0030659	cytoplasmic vesicle membrane	Mreg	IDA		Mouse	MGI:MGI:3848102|PMID:19240024
Cellular Component	GO:0031902	late endosome membrane	Mreg	IDA		Mouse	MGI:MGI:6244097|PMID:30174147
Cellular Component	GO:0042470	melanosome	Mreg	IDA		Mouse	PMID:22275436
Cellular Component	GO:0033162	melanosome membrane	Mreg	IDA		Mouse	MGI:MGI:5447858|PMID:22940130
Cellular Component	GO:0031090	organelle membrane	Mreg	IDA		Mouse	MGI:MGI:5447858|PMID:22940130
Cellular Component	GO:0032991	protein-containing complex	Mreg	IDA		Mouse	PMID:22275436
Biological Process	GO:0042640	anagen	Mreg	IMP	MGI:MGI:1856847	Mouse	PMID:15550542
Biological Process	GO:0048066	developmental pigmentation	Mreg	IMP	MGI:MGI:1856847	Mouse	PMID:15550542
Biological Process	GO:0030318	melanocyte differentiation	Mreg	IMP	MGI:MGI:1856847	Mouse	PMID:2379821
Biological Process	GO:0030318	melanocyte differentiation	Mreg	IMP	MGI:MGI:1856847	Mouse	PMID:7828830
Biological Process	GO:0032400	melanosome localization	Mreg	IMP		Mouse	MGI:MGI:5447858|PMID:22940130
Biological Process	GO:0032402	melanosome transport	Mreg	IDA		Mouse	PMID:22275436
Biological Process	GO:0072385	minus-end-directed organelle transport along microtubule	Mreg	IMP		Mouse	MGI:MGI:6244097|PMID:30174147
Biological Process	GO:0090382	phagosome maturation	Mreg	IMP		Mouse	MGI:MGI:3848102|PMID:19240024
Biological Process	GO:0043473	pigmentation	Mreg	IMP	MGI:MGI:1856847	Mouse	PMID:2379821
Biological Process	GO:0043473	pigmentation	Mreg	IMP	MGI:MGI:1856847	Mouse	PMID:7828830
Biological Process	GO:0043473	pigmentation	Mreg	IMP	MGI:MGI:1856847	Mouse	PMID:3141922

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern