Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MSI2
  • Mouse genes Msi2
  • Rat genes Msi2
  • Zfish genes msi2a,msi2b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Msi2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	MSI2	IPI	UniProtKB:Q96DH6	Human	PMID:30367664
Molecular Function	GO:0008266	poly(U) RNA binding	Msi2	IDA		Mouse	PMID:11588182
Molecular Function	GO:0005515	protein binding	MSI2	IPI	UniProtKB:P50222	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MSI2	IPI	UniProtKB:P55795	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	MSI2	IPI	UniProtKB:P10636-8	Human	PMID:30367664
Molecular Function	GO:0005515	protein binding	MSI2	IPI	UniProtKB:P31943	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	MSI2	IPI	UniProtKB:P55795	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	MSI2	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	MSI2	HDA		Human	PMID:22681889
Molecular Function	GO:0003727	single-stranded RNA binding	Msi2	IDA		Mouse	PMID:11588182
Cellular Component	GO:0005737	cytoplasm	Msi2	IDA		Mouse	PMID:11588182
Cellular Component	GO:0005829	cytosol	MSI2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	MSI2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005844	polysome	Msi2	IDA		Mouse	PMID:11588182
Biological Process	GO:0021772	olfactory bulb development	msi2b	IMP	ZFIN:ZDB-MRPHLNO-070126-7,ZFIN:ZDB-MRPHLNO-140505-2	Zfish	PMID:24420905
Biological Process	GO:0021772	olfactory bulb development	msi2b	IMP	ZFIN:ZDB-MRPHLNO-070126-7,ZFIN:ZDB-MRPHLNO-140505-1	Zfish	PMID:24420905
Biological Process	GO:0048864	stem cell development	Msi2	IMP		Mouse	MGI:MGI:2450014|PMID:12407178

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern