Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MYF6
  • Mouse genes Myf6
  • Rat genes Myf6
  • Zfish genes myf6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Myf6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Myf6	IDA		Mouse	PMID:24361185
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	MYF6	IDA		Human	PMID:28473536
Cellular Component	GO:0005829	cytosol	MYF6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0072686	mitotic spindle	MYF6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	MYF6	IDA		Human	GO_REF:0000052
Biological Process	GO:0006351	DNA-templated transcription	Myf6	IDA		Mouse	MGI:MGI:5565628|PMID:24361185
Biological Process	GO:0060415	muscle tissue morphogenesis	Myf6	IMP	MGI:MGI:1913092	Mouse	PMID:19531352
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Myf6	IMP	MGI:MGI:1913092	Mouse	PMID:7797078
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Myf6	IMP	MGI:MGI:1927607	Mouse	PMID:7720708
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Myf6	IDA		Mouse	MGI:MGI:5565628|PMID:24361185
Biological Process	GO:0035914	skeletal muscle cell differentiation	Myf6	IMP		Mouse	PMID:22147266
Biological Process	GO:0007519	skeletal muscle tissue development	Myf6	IGI	MGI:MGI:97252	Mouse	PMID:19531352
Biological Process	GO:0007519	skeletal muscle tissue development	Myf6	IMP	MGI:MGI:1927607	Mouse	PMID:7720708
Biological Process	GO:0007519	skeletal muscle tissue development	Myf6	IMP	MGI:MGI:1857220	Mouse	PMID:7588068
Biological Process	GO:0007519	skeletal muscle tissue development	myf6	IMP	ZFIN:ZDB-MRPHLNO-080707-3,ZFIN:ZDB-MRPHLNO-080707-4	Zfish	PMID:18297736
Biological Process	GO:0007519	skeletal muscle tissue development	myf6	IMP	ZFIN:ZDB-MRPHLNO-080707-5	Zfish	PMID:18297736
Biological Process	GO:0007519	skeletal muscle tissue development	myf6	IMP	ZFIN:ZDB-MRPHLNO-080707-4	Zfish	PMID:18297736
Biological Process	GO:0007519	skeletal muscle tissue development	myf6	IMP	ZFIN:ZDB-MRPHLNO-080707-2	Zfish	PMID:18297736
Biological Process	GO:0043403	skeletal muscle tissue regeneration	Myf6	IMP		Rat	PMID:12707053|RGD:1600530
Biological Process	GO:0001756	somitogenesis	Myf6	IMP	MGI:MGI:1857220	Mouse	PMID:7588068

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern