Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes N4BP1
  • Mouse genes N4bp1
  • Rat genes N4bp1
  • Zfish genes n4bp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set N4bp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003729	mRNA binding	N4BP1	IDA		Human	PMID:31133753
Molecular Function	GO:0005515	protein binding	N4BP1	IPI	UniProtKB:Q96J02	Human	PMID:17592138
Molecular Function	GO:0005515	protein binding	N4BP1	IPI	UniProtKB:Q9QYP6	Human	PMID:21903422
Molecular Function	GO:0005515	protein binding	N4BP1	IPI	UniProtKB:O15344	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	N4BP1	IPI	UniProtKB:Q99732	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	N4bp1	IPI	UniProtKB:Q96J02	Mouse	MGI:MGI:3829128|PMID:17592138
Molecular Function	GO:0005515	protein binding	N4bp1	IPI	PR:P46935	Mouse	PMID:11717310
Molecular Function	GO:0004540	RNA nuclease activity	N4BP1	IDA		Human	PMID:31133753
Molecular Function	GO:0043130	ubiquitin binding	N4BP1	IDA		Human	PMID:31319543
Cellular Component	GO:0005829	cytosol	N4bp1	IDA		Mouse	MGI:MGI:6472603|PMID:32971525
Cellular Component	GO:0005730	nucleolus	N4bp1	IDA		Mouse	MGI:MGI:4452185|PMID:20233849
Cellular Component	GO:0005634	nucleus	N4bp1	IDA		Mouse	PMID:11717310
Cellular Component	GO:0016605	PML body	N4bp1	IDA		Mouse	MGI:MGI:4452185|PMID:20233849
Biological Process	GO:0034644	cellular response to UV	N4BP1	IMP		Human	PMID:17592138
Biological Process	GO:0034644	cellular response to UV	N4bp1	IMP		Mouse	MGI:MGI:3829128|PMID:17592138
Biological Process	GO:0001818	negative regulation of cytokine production	N4bp1	IMP		Mouse	MGI:MGI:6472603|PMID:32971525
Biological Process	GO:0032435	negative regulation of proteasomal ubiquitin-dependent protein catabolic process	N4bp1	IDA		Mouse	MGI:MGI:3829128|PMID:17592138
Biological Process	GO:0031397	negative regulation of protein ubiquitination	N4bp1	IDA		Mouse	MGI:MGI:3829128|PMID:17592138
Biological Process	GO:0045071	negative regulation of viral genome replication	N4BP1	IDA		Human	PMID:31133753
Biological Process	GO:0045088	regulation of innate immune response	N4bp1	IDA		Mouse	MGI:MGI:6472603|PMID:32971525

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern