Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NABP1
  • Mouse genes Nabp1
  • Rat genes Nabp1
  • Zfish genes nabp1a,nabp1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nabp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NABP1	IPI	UniProtKB:Q68E01	Human	PMID:19683501
Molecular Function	GO:0005515	protein binding	NABP1	IPI	UniProtKB:P38159	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NABP1	IPI	UniProtKB:Q12800	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NABP1	IPI	UniProtKB:Q13064	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NABP1	IPI	UniProtKB:Q5VWX1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NABP1	IPI	UniProtKB:Q96PU8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NABP1	IPI	UniProtKB:P38159	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NABP1	IPI	UniProtKB:Q04864-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NABP1	IPI	UniProtKB:Q96QR8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NABP1	IPI	UniProtKB:Q9C029	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NABP1	IPI	UniProtKB:Q9UNS2	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	Nabp1	IDA		Mouse	PMID:16533169
Molecular Function	GO:0003697	single-stranded DNA binding	Nabp1	IDA		Mouse	PMID:16533169
Cellular Component	GO:0000781	chromosome, telomeric region	Nabp1	IDA		Mouse	MGI:MGI:5707583|PMID:23459151
Cellular Component	GO:0005829	cytosol	NABP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	NABP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	NABP1	IDA		Human	PMID:19683501
Cellular Component	GO:0005634	nucleus	Nabp1	IDA		Mouse	PMID:16533169
Cellular Component	GO:0035861	site of double-strand break	NABP1	IDA		Human	PMID:19683501
Cellular Component	GO:0070876	SOSS complex	NABP1	IPI		Human	PMID:19683501
Cellular Component	GO:0070876	SOSS complex	NABP1	IDA		Human	PMID:18449195
Cellular Component	GO:0070876	SOSS complex	NABP1	IDA		Human	PMID:19683501
Biological Process	GO:0006974	DNA damage response	NABP1	IMP		Human	PMID:19683501
Biological Process	GO:0006281	DNA repair	NABP1	IMP		Human	PMID:19683501
Biological Process	GO:0000724	double-strand break repair via homologous recombination	NABP1	IMP		Human	PMID:19605351
Biological Process	GO:0000724	double-strand break repair via homologous recombination	NABP1	IDA		Human	PMID:19683501
Biological Process	GO:0044818	mitotic G2/M transition checkpoint	NABP1	IDA		Human	PMID:19683501
Biological Process	GO:0044818	mitotic G2/M transition checkpoint	NABP1	IMP		Human	PMID:19683501
Biological Process	GO:0010212	response to ionizing radiation	NABP1	IMP		Human	PMID:19605351
Biological Process	GO:0010212	response to ionizing radiation	NABP1	IMP		Human	PMID:19683501

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern