Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NCBP1
  • Mouse genes Ncbp1
  • Rat genes Ncbp1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ncbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0060090	molecular adaptor activity	NCBP1	EXP		Human	PMID:11545740
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:11545740
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:12374755
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:12434151
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:O75150	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:Q86V81	Human	PMID:17190602
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:Q9NZI8	Human	PMID:17289661
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P60228	Human	PMID:17468741
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P62753	Human	PMID:18423201
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:Q9BY77	Human	PMID:18423201
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:O43310	Human	PMID:19648179
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298-1	Human	PMID:19668212
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:O95453	Human	PMID:20379136
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:Q53F19	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P11940	Human	PMID:23665581
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298-1	Human	PMID:23665581
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P17844	Human	PMID:23788676
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:O43172,UniProtKB:P52298	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:O75643,UniProtKB:P52298	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P08621,UniProtKB:P52298	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P09012,UniProtKB:P52298	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298,UniProtKB:Q15029	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298,UniProtKB:Q15459	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298,UniProtKB:Q6P2Q9	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298,UniProtKB:Q86VM9	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298,UniProtKB:Q8WWY3	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298,UniProtKB:Q9BXP5	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:Q14147	Human	PMID:25220460
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:Q53F19	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:O60293	Human	PMID:27871484
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:29101316
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:29997244
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:31467278
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:O43586	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:O75150	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:Q5VTR2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P11940	Human	PMID:32960270
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:32960270
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:Q53F19	Human	PMID:32960270
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:O00505	Human	PMID:34564892
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52298	Human	PMID:7478990
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P31943	Human	PMID:9111328
Molecular Function	GO:0005515	protein binding	NCBP1	IPI	UniProtKB:P52597	Human	PMID:9111328
Molecular Function	GO:0005515	protein binding	Ncbp1	IPI	UniProtKB:Q99MR6	Mouse	MGI:MGI:4359572|PMID:19632182
Molecular Function	GO:0005515	protein binding	Ncbp1	IPI	PR:O54943	Mouse	PMID:22767893
Molecular Function	GO:0005515	protein binding	Ncbp1	IPI	UniProtKB:Q69ZR9	Mouse	PMID:31112734
Molecular Function	GO:0000340	RNA 7-methylguanosine cap binding	NCBP1	IMP		Human	PMID:23793891
Molecular Function	GO:0003723	RNA binding	NCBP1	HDA		Human	PMID:22681889
Cellular Component	GO:0005737	cytoplasm	NCBP1	IDA		Human	PMID:26382858
Cellular Component	GO:0005829	cytosol	NCBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	NCBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005845	mRNA cap binding complex	NCBP1	IPI		Human	PMID:26382858
Cellular Component	GO:0005845	mRNA cap binding complex	NCBP1	IPI		Human	PMID:8069914
Cellular Component	GO:0005845	mRNA cap binding complex	NCBP1	IDA		Human	PMID:12434151
Cellular Component	GO:0005845	mRNA cap binding complex	NCBP1	IDA		Human	PMID:7651522
Cellular Component	GO:0005845	mRNA cap binding complex	NCBP1	IDA		Human	PMID:9342333
Cellular Component	GO:0005846	nuclear cap binding complex	NCBP1	IPI		Human	PMID:26382858
Cellular Component	GO:0005846	nuclear cap binding complex	NCBP1	IPI		Human	PMID:8069914
Cellular Component	GO:0005846	nuclear cap binding complex	Ncbp1	IDA		Rat	PMID:9933612|RGD:9684949
Cellular Component	GO:0005654	nucleoplasm	NCBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	NCBP1	IDA		Human	PMID:19648179
Cellular Component	GO:0005634	nucleus	NCBP1	IDA		Human	PMID:26382858
Cellular Component	GO:0005634	nucleus	NCBP1	IDA		Human	PMID:8069914
Cellular Component	GO:0005634	nucleus	NCBP1	IDA		Human	PMID:9342333
Cellular Component	GO:0005634	nucleus	Ncbp1	IDA		Rat	PMID:9933612|RGD:9684949
Cellular Component	GO:1990904	ribonucleoprotein complex	NCBP1	IDA		Human	PMID:17289661
Cellular Component	GO:0034518	RNA cap binding complex	NCBP1	IMP		Human	PMID:23793891
Biological Process	GO:0006370	7-methylguanosine mRNA capping	NCBP1	IDA		Human	PMID:12434151
Biological Process	GO:0051607	defense response to virus	NCBP1	IMP		Human	PMID:26382858
Biological Process	GO:0008334	histone mRNA metabolic process	NCBP1	IMP		Human	PMID:17499042
Biological Process	GO:0008334	histone mRNA metabolic process	Ncbp1	IMP		Mouse	MGI:MGI:6827193|PMID:17499042
Biological Process	GO:0006406	mRNA export from nucleus	NCBP1	IMP		Human	PMID:17190602
Biological Process	GO:0006406	mRNA export from nucleus	NCBP1	IPI		Human	PMID:21326824
Biological Process	GO:0006406	mRNA export from nucleus	NCBP1	IMP		Human	PMID:26382858
Biological Process	GO:0042789	mRNA transcription by RNA polymerase II	NCBP1	EXP		Human	PMID:21326824
Biological Process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	NCBP1	IDA		Human	PMID:11551508
Biological Process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	NCBP1	IDA		Human	PMID:17873884
Biological Process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	NCBP1	IMP		Human	PMID:18369367
Biological Process	GO:0030307	positive regulation of cell growth	NCBP1	IMP		Human	PMID:26382858
Biological Process	GO:0031442	positive regulation of mRNA 3'-end processing	NCBP1	IMP		Human	PMID:9342333
Biological Process	GO:0048026	positive regulation of mRNA splicing, via spliceosome	NCBP1	IMP		Human	PMID:23793891
Biological Process	GO:1905216	positive regulation of RNA binding	NCBP1	IMP		Human	PMID:23793891
Biological Process	GO:0098789	pre-mRNA cleavage required for polyadenylation	NCBP1	IMP		Human	PMID:9342333
Biological Process	GO:0006446	regulation of translational initiation	NCBP1	IDA		Human	PMID:11551508
Biological Process	GO:0006401	RNA catabolic process	NCBP1	IMP		Human	PMID:25578728
Biological Process	GO:0006408	snRNA export from nucleus	NCBP1	IMP		Human	PMID:26382858
Biological Process	GO:0000245	spliceosomal complex assembly	NCBP1	IMP		Human	PMID:23793891

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern