Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NCBP2,NCBP2L
  • Mouse genes Ncbp2
  • Rat genes Ncbp2
  • Zfish genes ncbp2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ncbp2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	NCBP2	EXP		Human	PMID:11545740
Molecular Function	GO:0003729	mRNA binding	NCBP2	IDA		Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:11545740
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:12374755
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:12434151
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:O43172,UniProtKB:Q09161	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:O75643,UniProtKB:Q09161	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:P08621,UniProtKB:Q09161	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:P09012,UniProtKB:Q09161	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161,UniProtKB:Q15029	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161,UniProtKB:Q15459	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161,UniProtKB:Q6P2Q9	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161,UniProtKB:Q86VM9	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161,UniProtKB:Q8WWY3	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161,UniProtKB:Q9BXP5	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q9BRK4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:O00505	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q9BXP5	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q9H814	Human	PMID:26382858
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:29101316
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:29997244
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:31467278
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:32960270
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:O00505	Human	PMID:34564892
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:Q09161	Human	PMID:7478990
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:P31943	Human	PMID:9111328
Molecular Function	GO:0005515	protein binding	NCBP2	IPI	UniProtKB:P52597	Human	PMID:9111328
Molecular Function	GO:0000340	RNA 7-methylguanosine cap binding	NCBP2	IDA		Human	PMID:12434151
Molecular Function	GO:0000340	RNA 7-methylguanosine cap binding	NCBP2	IDA		Human	PMID:18426921
Molecular Function	GO:0000340	RNA 7-methylguanosine cap binding	NCBP2	IMP		Human	PMID:23793891
Molecular Function	GO:0000340	RNA 7-methylguanosine cap binding	Ncbp2	IDA		Rat	PMID:9933612|RGD:9684949
Molecular Function	GO:0003723	RNA binding	NCBP2	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	NCBP2	HDA		Human	PMID:22681889
Molecular Function	GO:0017069	snRNA binding	NCBP2	IDA		Human	PMID:26382858
Cellular Component	GO:0005737	cytoplasm	NCBP2	IDA		Human	PMID:8601613
Cellular Component	GO:0005845	mRNA cap binding complex	NCBP2	IPI		Human	PMID:8069914
Cellular Component	GO:0005845	mRNA cap binding complex	NCBP2	IDA		Human	PMID:12434151
Cellular Component	GO:0005845	mRNA cap binding complex	NCBP2	IDA		Human	PMID:7651522
Cellular Component	GO:0005845	mRNA cap binding complex	NCBP2	IDA		Human	PMID:9342333
Cellular Component	GO:0005846	nuclear cap binding complex	NCBP2	IPI		Human	PMID:8069914
Cellular Component	GO:0005846	nuclear cap binding complex	Ncbp2	IDA		Rat	PMID:9933612|RGD:9684949
Cellular Component	GO:0005654	nucleoplasm	NCBP2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	NCBP2	IDA		Human	PMID:8601613
Cellular Component	GO:0005634	nucleus	NCBP2	IDA		Human	PMID:8069914
Cellular Component	GO:0005634	nucleus	NCBP2	IDA		Human	PMID:9342333
Cellular Component	GO:0005634	nucleus	Ncbp2	IDA		Rat	PMID:9933612|RGD:9684949
Cellular Component	GO:0034518	RNA cap binding complex	NCBP2	IMP		Human	PMID:23793891
Biological Process	GO:0008334	histone mRNA metabolic process	NCBP2	IMP		Human	PMID:17499042
Biological Process	GO:0008334	histone mRNA metabolic process	Ncbp2	IMP		Mouse	MGI:MGI:6827193|PMID:17499042
Biological Process	GO:0045292	mRNA cis splicing, via spliceosome	NCBP2	IDA		Human	PMID:18426921
Biological Process	GO:0006406	mRNA export from nucleus	NCBP2	IPI		Human	PMID:21326824
Biological Process	GO:0042789	mRNA transcription by RNA polymerase II	NCBP2	EXP		Human	PMID:21326824
Biological Process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	NCBP2	IDA		Human	PMID:11551508
Biological Process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	NCBP2	IMP		Human	PMID:17873884
Biological Process	GO:0000184	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	NCBP2	IMP		Human	PMID:18369367
Biological Process	GO:0031442	positive regulation of mRNA 3'-end processing	NCBP2	IMP		Human	PMID:9342333
Biological Process	GO:0098789	pre-mRNA cleavage required for polyadenylation	NCBP2	IMP		Human	PMID:9342333
Biological Process	GO:0006446	regulation of translational initiation	NCBP2	IDA		Human	PMID:11551508

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern