Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NCDN
  • Mouse genes Ncdn
  • Rat genes Ncdn
  • Zfish genes ncdn
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ncdn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NCDN	IPI	UniProtKB:Q9BSI4	Human	PMID:21044950
Molecular Function	GO:0005515	protein binding	NCDN	IPI	UniProtKB:Q08117	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NCDN	IPI	UniProtKB:Q5JST6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NCDN	IPI	UniProtKB:O95678	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NCDN	IPI	UniProtKB:O96006	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NCDN	IPI	UniProtKB:P26367	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NCDN	IPI	UniProtKB:Q5JST6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NCDN	IPI	UniProtKB:Q8TD17	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Ncdn	IPI	UniProtKB:O08808	Mouse	MGI:MGI:3807403|PMID:18572016
Molecular Function	GO:0005515	protein binding	Ncdn	IPI	UniProtKB:P31424	Rat	PMID:20007903|RGD:8554035
Cellular Component	GO:0005829	cytosol	NCDN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	NCDN	IDA		Human	PMID:23687301
Cellular Component	GO:0005829	cytosol	Ncdn	IDA		Rat	PMID:10521593|RGD:8553680
Cellular Component	GO:0030425	dendrite	Ncdn	IDA		Rat	PMID:10521593|RGD:8553680
Cellular Component	GO:0030425	dendrite	Ncdn	IDA		Rat	PMID:23687301|RGD:21201276
Cellular Component	GO:0010008	endosome membrane	Ncdn	IDA		Rat	PMID:23687301|RGD:21201276
Cellular Component	GO:0016020	membrane	NCDN	HDA		Human	PMID:19946888
Cellular Component	GO:0016020	membrane	NCDN	IDA		Human	PMID:23687301
Cellular Component	GO:0043005	neuron projection	Ncdn	IDA		Mouse	MGI:MGI:3807403|PMID:18572016
Cellular Component	GO:0043025	neuronal cell body	Ncdn	IDA		Rat	PMID:10521593|RGD:8553680
Cellular Component	GO:0043204	perikaryon	Ncdn	IDA		Rat	PMID:23687301|RGD:21201276
Cellular Component	GO:0098794	postsynapse	Ncdn	IDA		Rat	PMID:23687301|RGD:21201276
Biological Process	GO:0045453	bone resorption	Ncdn	IDA		Mouse	PMID:10231559
Biological Process	GO:0031175	neuron projection development	Ncdn	IDA		Mouse	MGI:MGI:3807403|PMID:18572016
Biological Process	GO:0031175	neuron projection development	Ncdn	IEP		Rat	PMID:10521593|RGD:8553680
Biological Process	GO:0048168	regulation of neuronal synaptic plasticity	Ncdn	IDA		Rat	PMID:9398642|RGD:724406

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern