Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NEDD1
  • Mouse genes Nedd1
  • Rat genes Nedd1
  • Zfish genes nedd1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nedd1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NEDD1	IPI	UniProtKB:Q7Z4H7	Human	PMID:19369198
Molecular Function	GO:0005515	protein binding	NEDD1	IPI	UniProtKB:P0DMV8	Human	PMID:27137183
Molecular Function	GO:0005515	protein binding	NEDD1	IPI	UniProtKB:P0DMV9	Human	PMID:27137183
Cellular Component	GO:0045177	apical part of cell	Nedd1	IDA		Mouse	PMID:18239929
Cellular Component	GO:0005814	centriole	Nedd1	IDA		Mouse	PMID:18239929
Cellular Component	GO:0005813	centrosome	NEDD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005813	centrosome	NEDD1	IDA		Human	PMID:21399614
Cellular Component	GO:0005813	centrosome	NEDD1	IDA		Human	PMID:27137183
Cellular Component	GO:0005813	centrosome	Nedd1	IDA		Mouse	PMID:18239929
Cellular Component	GO:0005813	centrosome	nedd1	IDA		Zfish	PMID:20150915
Cellular Component	GO:0036064	ciliary basal body	Nedd1	IDA		Mouse	PMID:18239929
Cellular Component	GO:0005737	cytoplasm	Nedd1	IDA		Mouse	PMID:18239929
Cellular Component	GO:0005737	cytoplasm	nedd1	IDA		Zfish	PMID:20150915
Cellular Component	GO:0005829	cytosol	NEDD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0001650	fibrillar center	NEDD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	NEDD1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000242	pericentriolar material	Nedd1	IDA		Mouse	PMID:18239929
Cellular Component	GO:0000922	spindle pole	Nedd1	IDA		Mouse	PMID:18239929
Biological Process	GO:0071539	protein localization to centrosome	nedd1	IMP	ZFIN:ZDB-MRPHLNO-100915-2,ZFIN:ZDB-MRPHLNO-100915-3	Zfish	PMID:20150915

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern