Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NEIL1
  • Mouse genes Neil1
  • Rat genes Neil1
  • Zfish genes neil1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Neil1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019104	DNA N-glycosylase activity	Neil1	IDA		Mouse	PMID:12200441
Molecular Function	GO:0016798	hydrolase activity, acting on glycosyl bonds	NEIL1	IDA		Human	PMID:17611195
Molecular Function	GO:0016829	lyase activity	Neil1	IDA		Mouse	PMID:12200441
Molecular Function	GO:0005515	protein binding	NEIL1	IPI	UniProtKB:Q14191	Human	PMID:17611195
Cellular Component	GO:0005737	cytoplasm	NEIL1	IDA		Human	PMID:17611195
Cellular Component	GO:0005654	nucleoplasm	NEIL1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	NEIL1	IDA		Human	PMID:17611195
Cellular Component	GO:0005634	nucleus	Neil1	IDA		Mouse	PMID:12200441
Biological Process	GO:0006284	base-excision repair	NEIL1	IDA		Human	PMID:17611195
Biological Process	GO:0006281	DNA repair	Neil1	IDA		Mouse	PMID:12200441
Biological Process	GO:0032074	negative regulation of nuclease activity	NEIL1	IDA		Human	PMID:17611195
Biological Process	GO:0006979	response to oxidative stress	NEIL1	IDA		Human	PMID:17611195

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern