Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NEIL3
  • Mouse genes Neil3
  • Rat genes Neil3
  • Zfish genes neil3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Neil3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000405	bubble DNA binding	Neil3	IDA		Mouse	MGI:MGI:4440390|PMID:20185759
Molecular Function	GO:0019104	DNA N-glycosylase activity	NEIL3	IDA		Human	PMID:23755964
Molecular Function	GO:0019104	DNA N-glycosylase activity	Neil3	IDA		Mouse	MGI:MGI:4440390|PMID:20185759
Molecular Function	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	NEIL3	IDA		Human	PMID:19170771
Molecular Function	GO:0003906	DNA-(apurinic or apyrimidinic site) endonuclease activity	Neil3	IDA		Mouse	MGI:MGI:4440390|PMID:20185759
Molecular Function	GO:0003690	double-stranded DNA binding	Neil3	IDA		Mouse	MGI:MGI:4440390|PMID:20185759
Molecular Function	GO:0003697	single-stranded DNA binding	NEIL3	IDA		Human	PMID:19170771
Molecular Function	GO:0003697	single-stranded DNA binding	Neil3	IDA		Mouse	MGI:MGI:4440390|PMID:20185759
Cellular Component	GO:0005654	nucleoplasm	NEIL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	NEIL3	IDA		Human	PMID:12433996
Cellular Component	GO:0005634	nucleus	Neil3	IDA		Mouse	MGI:MGI:3838134|PMID:16428305
Biological Process	GO:0006284	base-excision repair	NEIL3	IDA		Human	PMID:23755964
Biological Process	GO:0006284	base-excision repair	Neil3	IDA		Mouse	MGI:MGI:4440390|PMID:20185759

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern