Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NELFCD
  • Mouse genes Nelfcd
  • Rat genes Nelfcd
  • Zfish genes nelfcd
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nelfcd

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NELFCD	IPI	UniProtKB:P10398	Human	PMID:12620389
Molecular Function	GO:0005515	protein binding	NELFCD	IPI	UniProtKB:Q9H3P2	Human	PMID:20211142
Molecular Function	GO:0005515	protein binding	NELFCD	IPI	UniProtKB:P10398	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	NELFCD	IPI	UniProtKB:Q9H3P2	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	NELFCD	IPI	UniProtKB:Q9H3P2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NELFCD	IPI	UniProtKB:A0A1U9X8X8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NELFCD	IPI	UniProtKB:Q8WX92-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NELFCD	IPI	UniProtKB:Q9H3P2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NELFCD	IPI	UniProtKB:O14901	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NELFCD	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NELFCD	IPI	UniProtKB:Q9BVL2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Nelfcd	IPI	UniProtKB:Q9D1P2	Mouse	MGI:MGI:3706282|PMID:17335777
Molecular Function	GO:0005515	protein binding	Nelfcd	IPI	UniProtKB:Q8C4Y3	Mouse	MGI:MGI:6250769|PMID:26010750
Cellular Component	GO:0016020	membrane	NELFCD	HDA		Human	PMID:19946888
Cellular Component	GO:0032021	NELF complex	NELFCD	IPI		Human	PMID:12612062
Cellular Component	GO:0032021	NELF complex	NELFCD	IDA		Human	PMID:12612062
Cellular Component	GO:0005634	nucleus	NELFCD	IDA		Human	PMID:12612062
Biological Process	GO:0034244	negative regulation of transcription elongation by RNA polymerase II	NELFCD	IDA		Human	PMID:12612062

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern