Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Neurod1

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes NEUROD1
- Mouse genes Neurod1
- Rat genes Neurod1
- Zfish genes neurod1
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Neurod1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Neurod1	IDA		Mouse	MGI:MGI:5009389\|PMID:18007592
Molecular Function	GO:0003677	DNA binding	Neurod1	IDA		Mouse	PMID:12368292
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	NEUROD1	IDA		Human	PMID:14752053
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	Neurod1	IDA		Mouse	MGI:MGI:5572896\|PMID:11981044
Molecular Function	GO:0003700	DNA-binding transcription factor activity	NEUROD1	IDA		Human	PMID:10545951
Molecular Function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	NEUROD1	IDA		Human	PMID:19619559
Molecular Function	GO:0003690	double-stranded DNA binding	Neurod1	IDA		Rat	PMID:10101232\|RGD:727267
Molecular Function	GO:0070888	E-box binding	NEUROD1	IDA		Human	PMID:14752053
Molecular Function	GO:0070888	E-box binding	Neurod1	IDA		Mouse	MGI:MGI:2686763\|PMID:14697366
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:P15923	Human	PMID:14752053
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:Q09472	Human	PMID:14752053
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:Q15466	Human	PMID:14752053
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:Q99081-3	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:P15884-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:Q99081-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:O14901	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:O43464	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:P28331-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:P41219	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:P54652	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:Q0VDC6	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NEUROD1	IPI	UniProtKB:Q9BVL2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Neurod1	IPI	UniProtKB:Q99NA2	Mouse	MGI:MGI:3798332\|PMID:18560595
Molecular Function	GO:0005515	protein binding	Neurod1	IPI	UniProtKB:O95273	Mouse	MGI:MGI:5426104\|PMID:22453338
Molecular Function	GO:0005515	protein binding	Neurod1	IPI	UniProtKB:B2RWS6	Mouse	MGI:MGI:5009210\|PMID:9512516
Molecular Function	GO:0005515	protein binding	Neurod1	IPI	PR:Q62231	Mouse	PMID:22513373
Molecular Function	GO:0005515	protein binding	Neurod1	IPI	PR:P15806	Mouse	PMID:18388149
Molecular Function	GO:0005515	protein binding	Neurod1	IPI	PR:P13405	Mouse	PMID:15701640
Molecular Function	GO:0005515	protein binding	Neurod1	IPI	PR:P97767	Mouse	PMID:22513373
Molecular Function	GO:0005515	protein binding	Neurod1	IPI	PR:Q64701	Mouse	PMID:15701640
Molecular Function	GO:0046982	protein heterodimerization activity	NEUROD1	IPI	UniProtKB:P15923	Human	PMID:10545951
Molecular Function	GO:0046982	protein heterodimerization activity	NEUROD1	IDA		Human	PMID:14752053
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Neurod1	IDA		Mouse	MGI:MGI:5572896\|PMID:11981044
Molecular Function	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	NEUROD1	IPI	UniProtKB:P15923	Human	PMID:10545951
Molecular Function	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	NEUROD1	IPI	UniProtKB:P61371	Human	PMID:16321656
Molecular Function	GO:0061629	RNA polymerase II-specific DNA-binding transcription factor binding	NEUROD1	IPI	UniProtKB:P61371	Human	PMID:19619559
Molecular Function	GO:0043565	sequence-specific DNA binding	NEUROD1	IDA		Human	PMID:10545951
Molecular Function	GO:0043565	sequence-specific DNA binding	Neurod1	IDA		Mouse	PMID:18388149
Molecular Function	GO:0043565	sequence-specific DNA binding	Neurod1	IDA		Mouse	PMID:15793245
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	NEUROD1	IDA		Human	PMID:28473536
Cellular Component	GO:0005737	cytoplasm	Neurod1	IDA		Mouse	PMID:18388149
Cellular Component	GO:0005737	cytoplasm	Neurod1	IDA		Rat	PMID:12297313\|RGD:729237
Cellular Component	GO:0005622	intracellular anatomical structure	Neurod1	IDA		Mouse	PMID:10868931
Cellular Component	GO:0005622	intracellular anatomical structure	Neurod1	IDA		Mouse	PMID:15793245
Cellular Component	GO:0005634	nucleus	NEUROD1	IDA		Human	PMID:14752053
Cellular Component	GO:0005634	nucleus	Neurod1	IDA		Mouse	PMID:18388149
Cellular Component	GO:0005634	nucleus	Neurod1	IDA		Mouse	PMID:11891657
Cellular Component	GO:0005634	nucleus	Neurod1	IDA		Rat	PMID:12297313\|RGD:729237
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	NEUROD1	IDA		Human	PMID:10545951
Biological Process	GO:0035881	amacrine cell differentiation	Neurod1	IDA		Mouse	MGI:MGI:2158684\|PMID:11861467
Biological Process	GO:0009952	anterior/posterior pattern specification	Neurod1	IMP	MGI:MGI:2148229	Mouse	PMID:16368089
Biological Process	GO:0043010	camera-type eye development	Neurod1	IGI	MGI:MGI:108055	Mouse	PMID:11861467
Biological Process	GO:0062139	camera-type eye photoreceptor cell development	neurod1	IMP	ZFIN:ZDB-MRPHLNO-080317-1	Zfish	PMID:26580854
Biological Process	GO:0045165	cell fate commitment	Neurod1	IGI	MGI:MGI:108055	Mouse	PMID:11861467
Biological Process	GO:0071333	cellular response to glucose stimulus	Neurod1	IDA		Rat	PMID:12297313\|RGD:729237
Biological Process	GO:0021549	cerebellum development	Neurod1	IMP		Mouse	MGI:MGI:2159022\|PMID:10398678
Biological Process	GO:0021549	cerebellum development	Neurod1	IEP		Rat	PMID:12242038\|RGD:1625048
Biological Process	GO:0021542	dentate gyrus development	Neurod1	IMP		Mouse	MGI:MGI:1352314\|PMID:10639171
Biological Process	GO:0021542	dentate gyrus development	Neurod1	IMP		Mouse	MGI:MGI:2159022\|PMID:10398678
Biological Process	GO:0021542	dentate gyrus development	Neurod1	IGI	MGI:MGI:106593	Mouse	PMID:10804213
Biological Process	GO:0048562	embryonic organ morphogenesis	Neurod1	IMP		Mouse	MGI:MGI:1096974\|PMID:9308961
Biological Process	GO:0031018	endocrine pancreas development	Neurod1	IMP		Mouse	MGI:MGI:1096974\|PMID:9308961
Biological Process	GO:0031018	endocrine pancreas development	Neurod1	IMP		Mouse	MGI:MGI:1352314\|PMID:10639171
Biological Process	GO:0031018	endocrine pancreas development	neurod1	IMP	ZFIN:ZDB-MRPHLNO-050308-14	Zfish	PMID:23835295
Biological Process	GO:0031018	endocrine pancreas development	neurod1	IMP	ZFIN:ZDB-MRPHLNO-140819-1	Zfish	PMID:23835295
Biological Process	GO:0031018	endocrine pancreas development	neurod1	IMP	ZFIN:ZDB-MRPHLNO-140811-4	Zfish	PMID:23835295
Biological Process	GO:0035883	enteroendocrine cell differentiation	Neurod1	IMP		Mouse	MGI:MGI:1096974\|PMID:9308961
Biological Process	GO:0042593	glucose homeostasis	Neurod1	IMP		Mouse	MGI:MGI:1096974\|PMID:9308961
Biological Process	GO:0030902	hindbrain development	Neurod1	IMP	MGI:MGI:2148229	Mouse	PMID:16368089
Biological Process	GO:0048839	inner ear development	Neurod1	IMP		Mouse	MGI:MGI:1929186\|PMID:11152640
Biological Process	GO:0060119	inner ear receptor cell development	neurod1	IMP	ZFIN:ZDB-MRPHLNO-080317-1	Zfish	PMID:23152625
Biological Process	GO:0030073	insulin secretion	NEUROD1	IDA		Human	PMID:17941991
Biological Process	GO:0045746	negative regulation of Notch signaling pathway	neurod1	IMP	ZFIN:ZDB-MRPHLNO-080317-1	Zfish	PMID:26580854
Biological Process	GO:0046426	negative regulation of receptor signaling pathway via JAK-STAT	Neurod1	IDA		Mouse	PMID:18848628
Biological Process	GO:2000675	negative regulation of type B pancreatic cell apoptotic process	Neurod1	IMP		Mouse	MGI:MGI:1096974\|PMID:9308961
Biological Process	GO:0007263	nitric oxide mediated signal transduction	NEUROD1	IDA		Human	PMID:17941991
Biological Process	GO:0006913	nucleocytoplasmic transport	Neurod1	IDA		Rat	PMID:12297313\|RGD:729237
Biological Process	GO:0003326	pancreatic A cell fate commitment	Neurod1	IGI	MGI:MGI:97347	Mouse	PMID:17988662
Biological Process	GO:0003329	pancreatic PP cell fate commitment	Neurod1	IGI	MGI:MGI:97347	Mouse	PMID:17988662
Biological Process	GO:0043065	positive regulation of apoptotic process	Neurod1	IDA		Mouse	MGI:MGI:5009210\|PMID:9512516
Biological Process	GO:0045597	positive regulation of cell differentiation	Neurod1	IDA		Mouse	MGI:MGI:2158684\|PMID:11861467
Biological Process	GO:0045597	positive regulation of cell differentiation	Neurod1	IDA		Mouse	MGI:MGI:5009210\|PMID:9512516
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	NEUROD1	IDA		Human	PMID:14752053
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	Neurod1	IDA		Mouse	MGI:MGI:2686763\|PMID:14697366
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Neurod1	IDA		Mouse	MGI:MGI:2686763\|PMID:14697366
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Neurod1	IDA		Mouse	PMID:12368292
Biological Process	GO:0045666	positive regulation of neuron differentiation	Neurod1	IDA		Mouse	MGI:MGI:5009389\|PMID:18007592
Biological Process	GO:0045666	positive regulation of neuron differentiation	Neurod1	IDA		Rat	PMID:10101232\|RGD:727267
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	NEUROD1	IDA		Human	PMID:10545951
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Neurod1	IDA		Mouse	MGI:MGI:5009389\|PMID:18007592
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Neurod1	IDA		Mouse	MGI:MGI:5009210\|PMID:9512516
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Neurod1	IDA		Mouse	MGI:MGI:5572896\|PMID:11981044
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Neurod1	IDA		Mouse	PMID:15121856
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Neurod1	IMP	MGI:MGI:2148229	Mouse	PMID:15793245
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Neurod1	IGI	MGI:MGI:97874	Mouse	PMID:15701640
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Neurod1	IGI	MGI:MGI:1352454	Mouse	PMID:15701640
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Neurod1	IDA		Rat	PMID:12297313\|RGD:729237
Biological Process	GO:2000679	positive regulation of transcription regulatory region DNA binding	NEUROD1	IDA		Human	PMID:19619559
Biological Process	GO:0048923	posterior lateral line neuromast hair cell differentiation	neurod1	IMP	ZFIN:ZDB-MRPHLNO-080317-1	Zfish	PMID:16678150
Biological Process	GO:0007259	receptor signaling pathway via JAK-STAT	Neurod1	IDA		Mouse	PMID:18848628
Biological Process	GO:0031099	regeneration	neurod1	IMP	ZFIN:ZDB-MRPHLNO-080317-1	Zfish	PMID:26580854
Biological Process	GO:0060730	regulation of intestinal epithelial structure maintenance	Neurod1	IDA		Mouse	MGI:MGI:5009210\|PMID:9512516
Biological Process	GO:0045664	regulation of neuron differentiation	Neurod1	IGI	MGI:MGI:102780	Mouse	PMID:22513373
Biological Process	GO:0045664	regulation of neuron differentiation	Neurod1	IGI	MGI:MGI:109344	Mouse	PMID:22513373
Biological Process	GO:0045664	regulation of neuron differentiation	Neurod1	IGI	MGI:MGI:107754	Mouse	PMID:22513373
Biological Process	GO:0009749	response to glucose	NEUROD1	IMP		Human	PMID:10545951
Biological Process	GO:0009410	response to xenobiotic stimulus	Neurod1	IEP		Rat	PMID:16635253\|RGD:1643131
Biological Process	GO:0023019	signal transduction involved in regulation of gene expression	Neurod1	IDA		Mouse	PMID:18462699
Biological Process	GO:0006366	transcription by RNA polymerase II	Neurod1	IMP	MGI:MGI:2148229	Mouse	PMID:15793245

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.