Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NEUROD4
  • Mouse genes Neurod4
  • Rat genes Neurod4
  • Zfish genes neurod4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Neurod4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NEUROD4	IPI	UniProtKB:O15481	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NEUROD4	IPI	UniProtKB:P15884-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NEUROD4	IPI	UniProtKB:Q13526	Human	PMID:32296183
Biological Process	GO:0035881	amacrine cell differentiation	Neurod4	IDA		Mouse	MGI:MGI:2158684|PMID:11861467
Biological Process	GO:0043010	camera-type eye development	Neurod4	IGI	MGI:MGI:1339708	Mouse	PMID:11861467
Biological Process	GO:0045165	cell fate commitment	Neurod4	IGI	MGI:MGI:1339708	Mouse	PMID:11032813
Biological Process	GO:0021986	habenula development	neurod4	IGI	ZFIN:ZDB-GENO-090302-1,ZFIN:ZDB-MRPHLNO-070612-3	Zfish	PMID:27387288
Biological Process	GO:0097475	motor neuron migration	Neurod4	IMP	MGI:MGI:2158737	Mouse	PMID:15976074
Biological Process	GO:0097475	motor neuron migration	Neurod4	IGI	MGI:MGI:96919	Mouse	PMID:15976074
Biological Process	GO:0007399	nervous system development	neurod4	IGI	ZFIN:ZDB-GENE-990415-174	Zfish	PMID:12890499
Biological Process	GO:0001839	neural plate morphogenesis	neurod4	IMP		Zfish	PMID:12890499
Biological Process	GO:0007405	neuroblast proliferation	Neurod4	IGI	MGI:MGI:96919	Mouse	PMID:15976074
Biological Process	GO:0048666	neuron development	Neurod4	IMP	MGI:MGI:2158737	Mouse	PMID:15976074
Biological Process	GO:0007219	Notch signaling pathway	Neurod4	IGI	MGI:MGI:96919	Mouse	PMID:15976074
Biological Process	GO:0071698	olfactory placode development	neurod4	IGI	ZFIN:ZDB-GENO-090302-1,ZFIN:ZDB-MRPHLNO-070612-3	Zfish	PMID:21965609
Biological Process	GO:0048709	oligodendrocyte differentiation	Neurod4	IGI	MGI:MGI:96919	Mouse	PMID:15976074
Biological Process	GO:0045597	positive regulation of cell differentiation	Neurod4	IDA		Mouse	MGI:MGI:2158684|PMID:11861467
Biological Process	GO:0045597	positive regulation of cell differentiation	Neurod4	IMP		Rat	PMID:15345241|RGD:2311603
Biological Process	GO:0050769	positive regulation of neurogenesis	neurod4	IMP		Zfish	PMID:12890499
Biological Process	GO:0060041	retina development in camera-type eye	Neurod4	IEP		Rat	PMID:15345241|RGD:2311603

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern