Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NEXMIF
  • Mouse genes Nexmif
  • Rat genes Nexmif
  • Zfish genes nexmifa,nexmifb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nexmif

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0005829	cytosol	NEXMIF	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030496	midbody	NEXMIF	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	NEXMIF	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Nexmif	IDA		Rat	PMID:24071057|RGD:13442493
Biological Process	GO:0033629	negative regulation of cell adhesion mediated by integrin	Nexmif	IMP		Rat	PMID:24071057|RGD:13442493
Biological Process	GO:2000048	negative regulation of cell-cell adhesion mediated by cadherin	Nexmif	IMP		Rat	PMID:24071057|RGD:13442493
Biological Process	GO:0001953	negative regulation of cell-matrix adhesion	Nexmif	IMP		Rat	PMID:24071057|RGD:13442493
Biological Process	GO:2001223	negative regulation of neuron migration	Nexmif	IMP		Rat	PMID:24071057|RGD:13442493

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern