Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NFKBIB
  • Mouse genes Nfkbib
  • Rat genes Nfkbib
  • Zfish genes nfkbib
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nfkbib

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:Q04206	Human	PMID:10498867
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:Q04206	Human	PMID:14685242
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:P19838	Human	PMID:14743216
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:Q96EY1-1	Human	PMID:15601829
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:Q96EY1-2	Human	PMID:15601829
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:Q04206	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:P14340	Human	PMID:24973451
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:P14340:PRO_0000037965	Human	PMID:24973451
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:Q8N1B4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:P17568	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:Q96KE9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NFKBIB	IPI	UniProtKB:P19838	Human	PMID:35140242
Molecular Function	GO:0005515	protein binding	Nfkbib	IPI	UniProtKB:P15307|UniProtKB:Q04207	Mouse	MGI:MGI:4821660|PMID:20740013
Molecular Function	GO:0005515	protein binding	Nfkbib	IPI	UniProtKB:Q04207	Mouse	MGI:MGI:3688344|PMID:15102471
Molecular Function	GO:0005515	protein binding	Nfkbib	IPI	UniProtKB:Q9Z1K6	Mouse	MGI:MGI:5460916|PMID:23179078
Molecular Function	GO:0005515	protein binding	Nfkbib	IPI	UniProtKB:Q04207	Mouse	MGI:MGI:5284810|PMID:12686541
Cellular Component	GO:0005737	cytoplasm	Nfkbib	IDA		Rat	PMID:9343439|RGD:2298908
Cellular Component	GO:0005829	cytosol	Nfkbib	IDA		Rat	PMID:11058855|RGD:2298912
Biological Process	GO:0071222	cellular response to lipopolysaccharide	Nfkbib	IDA		Mouse	PMID:20060382
Biological Process	GO:0007253	cytoplasmic sequestering of NF-kappaB	Nfkbib	IMP		Rat	PMID:16580131|RGD:2298917
Biological Process	GO:0007253	cytoplasmic sequestering of NF-kappaB	Nfkbib	IMP		Rat	PMID:9343439|RGD:2298908
Biological Process	GO:0006954	inflammatory response	Nfkbib	IGI	MGI:MGI:1919216	Mouse	PMID:25220458
Biological Process	GO:0043122	regulation of I-kappaB kinase/NF-kappaB signaling	Nfkbib	IGI	MGI:MGI:1919216	Mouse	PMID:25220458
Biological Process	GO:0007165	signal transduction	Nfkbib	IDA		Rat	PMID:10827092|RGD:633403

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern