Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NFYB
  • Mouse genes Nfyb
  • Rat genes Nfyb
  • Zfish genes nfyba,nfybb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nfyb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	NFYB	IDA		Human	PMID:15243141
Molecular Function	GO:0003677	DNA binding	Nfyb	IDA		Mouse	PMID:15220343
Molecular Function	GO:0003677	DNA binding	Nfyb	IDA		Mouse	PMID:15601870
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	NFYB	IGI	UniProtKB:Q03701	Human	PMID:11306579
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Nfyb	IDA		Mouse	PMID:15601870
Molecular Function	GO:0140297	DNA-binding transcription factor binding	NFYB	IPI	UniProtKB:P06400	Human	PMID:19223331
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q13952	Human	PMID:12401788
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:P23511	Human	PMID:15243141
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q14919	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:P04637	Human	PMID:16959611
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:P23511	Human	PMID:16959611
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:P09429	Human	PMID:19223331
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q13952	Human	PMID:20936779
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q13952	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:P23511	Human	PMID:23332751
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:P04637	Human	PMID:23734815
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:P23511	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q14919	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q6RW13	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q9NR33	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:P23511-2	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q13952	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q13952-2	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:P23511-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q13952-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q9NR33	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:P06307	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:P13473-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q9Y371	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NFYB	IPI	UniProtKB:Q13952	Human	PMID:35140242
Molecular Function	GO:0044877	protein-containing complex binding	Nfyb	IDA		Rat	PMID:7878029|RGD:729287
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	NFYB	IDA		Human	PMID:11256944
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	NFYB	IDA		Human	PMID:11306579
Molecular Function	GO:0043565	sequence-specific DNA binding	Nfyb	IGI	MGI:MGI:97316	Mouse	PMID:1698608
Molecular Function	GO:0000976	transcription cis-regulatory region binding	NFYB	IDA		Human	PMID:11256944
Molecular Function	GO:0000976	transcription cis-regulatory region binding	Nfyb	IDA		Mouse	PMID:15516209
Cellular Component	GO:0016602	CCAAT-binding factor complex	NFYB	IPI		Human	PMID:23332751
Cellular Component	GO:0016602	CCAAT-binding factor complex	NFYB	IDA		Human	PMID:15243141
Cellular Component	GO:0016602	CCAAT-binding factor complex	Nfyb	IDA		Rat	PMID:7878029|RGD:729287
Cellular Component	GO:0005654	nucleoplasm	NFYB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	NFYB	IDA		Human	PMID:15243141
Cellular Component	GO:0005634	nucleus	NFYB	IDA		Human	PMID:15964792
Cellular Component	GO:0005634	nucleus	NFYB	IDA		Human	PMID:11306579
Cellular Component	GO:0005634	nucleus	Nfyb	IDA		Mouse	PMID:19734906
Cellular Component	GO:0032993	protein-DNA complex	NFYB	IDA		Human	PMID:11256944
Cellular Component	GO:0090575	RNA polymerase II transcription regulator complex	NFYB	IDA		Human	PMID:11256944
Biological Process	GO:1990830	cellular response to leukemia inhibitory factor	Nfyb	IEP		Mouse	PMID:20439489
Biological Process	GO:0080182	histone H3-K4 trimethylation	NFYB	IDA		Human	PMID:21445285
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	Nfyb	IDA		Mouse	PMID:15601870
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	NFYB	IDA		Human	PMID:11306579
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	NFYB	IDA		Human	PMID:23332751
Biological Process	GO:0006355	regulation of DNA-templated transcription	NFYB	IDA		Human	PMID:15243141
Biological Process	GO:0035065	regulation of histone acetylation	NFYB	IDA		Human	PMID:21304275

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern