Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NGRN
  • Mouse genes Ngrn
  • Rat genes Ngrn
  • Zfish genes ngrn
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ngrn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NGRN	IPI	UniProtKB:Q5VVQ6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NGRN	IPI	UniProtKB:Q6ZYL4	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	NGRN	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	NGRN	HDA		Human	PMID:22681889
Molecular Function	GO:0019843	rRNA binding	NGRN	IDA		Human	PMID:27667664
Cellular Component	GO:0045171	intercellular bridge	NGRN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031966	mitochondrial membrane	NGRN	IDA		Human	PMID:27667664
Cellular Component	GO:0005739	mitochondrion	NGRN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0072686	mitotic spindle	NGRN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016604	nuclear body	NGRN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	NGRN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Ngrn	IDA		Mouse	PMID:11118320
Biological Process	GO:0061668	mitochondrial ribosome assembly	NGRN	IMP		Human	PMID:27667664
Biological Process	GO:0070131	positive regulation of mitochondrial translation	NGRN	IMP		Human	PMID:27667664

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern