Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NINL
  • Mouse genes Ninl
  • Rat genes Ninl
  • Zfish genes ninl
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ninl

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q9P2K3	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q8TAU3	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q3B820	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q8IYE0-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q8NA19	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q8TAU3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q8TD31-3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q92993	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q96CS2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q96IZ5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q9H788	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NINL	IPI	UniProtKB:Q9P2K3	Human	PMID:25416956
Cellular Component	GO:0036064	ciliary basal body	ninl	IDA		Zfish	PMID:26485645
Cellular Component	GO:0005829	cytosol	NINL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0045171	intercellular bridge	NINL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0015630	microtubule cytoskeleton	NINL	IDA		Human	GO_REF:0000052
Biological Process	GO:0042462	eye photoreceptor cell development	ninl	IMP	ZFIN:ZDB-MRPHLNO-170227-4	Zfish	PMID:26485645
Biological Process	GO:0042462	eye photoreceptor cell development	ninl	IMP	ZFIN:ZDB-MRPHLNO-170227-3	Zfish	PMID:26485514
Biological Process	GO:0042462	eye photoreceptor cell development	ninl	IMP	ZFIN:ZDB-MRPHLNO-170227-3	Zfish	PMID:26485645
Biological Process	GO:0035845	photoreceptor cell outer segment organization	ninl	IGI	ZFIN:ZDB-GENO-100507-9,ZFIN:ZDB-MRPHLNO-170227-3	Zfish	PMID:26485645
Biological Process	GO:0035845	photoreceptor cell outer segment organization	ninl	IMP	ZFIN:ZDB-MRPHLNO-170227-3	Zfish	PMID:26485645

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern