Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NKX1-1
  • Mouse genes Nkx1-1
  • Rat genes Nkx1-1
  • Zfish genes nkx1.2lb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nkx1-1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Biological Process	GO:0006629	lipid metabolic process	Nkx1-1	IMP	MGI:MGI:2684149	Mouse	PMID:21126319
Biological Process	GO:0050877	nervous system process	Nkx1-1	IMP	MGI:MGI:2684149	Mouse	PMID:17879320
Biological Process	GO:0043467	regulation of generation of precursor metabolites and energy	Nkx1-1	IMP	MGI:MGI:2684149	Mouse	PMID:17879320
Biological Process	GO:0010906	regulation of glucose metabolic process	Nkx1-1	IMP	MGI:MGI:2684149	Mouse	PMID:21126319

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern