Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NLN
  • Mouse genes Nln
  • Rat genes Nln
  • Zfish genes nln
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nln

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004222	metalloendopeptidase activity	Nln	IDA		Rat	PMID:7836437|RGD:9831155
Molecular Function	GO:0070012	oligopeptidase activity	Nln	IDA		Rat	PMID:7836437|RGD:9831155
Molecular Function	GO:0008233	peptidase activity	Nln	IMP	MGI:MGI:4125183	Mouse	PMID:24719317
Molecular Function	GO:0008233	peptidase activity	Nln	IDA		Rat	PMID:12500972|RGD:152025518
Molecular Function	GO:0042277	peptide binding	Nln	IPI	MGI:MGI:87963	Mouse	PMID:22039052
Cellular Component	GO:0005829	cytosol	Nln	IDA		Rat	PMID:7836437|RGD:9831155
Cellular Component	GO:0005758	mitochondrial intermembrane space	Nln	IDA		Rat	PMID:7836437|RGD:9831155
Cellular Component	GO:0005739	mitochondrion	Nln	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005886	plasma membrane	Nln	IDA		Mouse	PMID:22039052
Biological Process	GO:0043171	peptide catabolic process	Nln	IDA		Rat	PMID:12500972|RGD:152025518
Biological Process	GO:0030163	protein catabolic process	Nln	IDA		Rat	PMID:7836437|RGD:9831155
Biological Process	GO:0006111	regulation of gluconeogenesis	Nln	IMP	MGI:MGI:4125183	Mouse	PMID:24719317
Biological Process	GO:1902809	regulation of skeletal muscle fiber differentiation	Nln	IMP	MGI:MGI:4125183	Mouse	PMID:24719333

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern