Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NOP56
  • Mouse genes Nop56
  • Rat genes Nop56
  • Zfish genes nop56
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nop56

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	NOP56	HDA		Human	PMID:25468996
Molecular Function	GO:1990226	histone methyltransferase binding	NOP56	IPI	UniProtKB:P22087	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NOP56	IPI	UniProtKB:Q9UHK0	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NOP56	IPI	UniProtKB:Q9Y2X3	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NOP56	IPI	UniProtKB:Q9H190	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	NOP56	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	NOP56	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	Nop56	IPI	MGI:MGI:5453296	Mouse	PMID:24174535
Molecular Function	GO:0030515	snoRNA binding	NOP56	IDA		Human	PMID:17636026
Cellular Component	GO:0001650	fibrillar center	NOP56	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	NOP56	HDA		Human	PMID:19946888
Cellular Component	GO:0070761	pre-snoRNP complex	NOP56	IDA		Human	PMID:17636026
Cellular Component	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	NOP56	IDA		Human	PMID:17636026
Biological Process	GO:0021556	central nervous system formation	nop56	IMP	ZFIN:ZDB-GENO-230220-2	Zfish	PMID:36009362
Biological Process	GO:0021549	cerebellum development	nop56	IMP	ZFIN:ZDB-GENO-230220-2	Zfish	PMID:36009362
Biological Process	GO:0007507	heart development	nop56	IMP	ZFIN:ZDB-GENO-040825-9	Zfish	PMID:19652097
Biological Process	GO:1905812	regulation of motor neuron axon guidance	nop56	IMP	ZFIN:ZDB-GENO-230220-2	Zfish	PMID:36009362
Biological Process	GO:1904396	regulation of neuromuscular junction development	nop56	IMP	ZFIN:ZDB-GENO-230220-2	Zfish	PMID:36009362
Biological Process	GO:0006364	rRNA processing	nop56	IMP	ZFIN:ZDB-GENO-230220-2	Zfish	PMID:36009362
Biological Process	GO:0036269	swimming behavior	nop56	IMP	ZFIN:ZDB-GENO-230220-2	Zfish	PMID:36009362
Biological Process	GO:0001966	thigmotaxis	nop56	IMP	ZFIN:ZDB-GENO-230220-2	Zfish	PMID:36009362

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern