Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NOP58
  • Mouse genes Nop58
  • Rat genes Nop58
  • Zfish genes nop58
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nop58

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051117	ATPase binding	NOP58	IPI	UniProtKB:Q9Y230	Human	PMID:17636026
Molecular Function	GO:0051117	ATPase binding	NOP58	IPI	UniProtKB:Q9Y265	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NOP58	IPI	UniProtKB:O00567	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NOP58	IPI	UniProtKB:Q9NWK9	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NOP58	IPI	UniProtKB:Q9NWS0	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NOP58	IPI	UniProtKB:Q9UHK0	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NOP58	IPI	UniProtKB:Q96RS0	Human	PMID:21522132
Molecular Function	GO:0005515	protein binding	NOP58	IPI	UniProtKB:Q8N5I9,UniProtKB:Q9Y230,UniProtKB:Q9Y265	Human	PMID:33367824
Molecular Function	GO:0005515	protein binding	Nop58	IPI	RGD:621578	Rat	PMID:10679015|RGD:633515
Molecular Function	GO:0003723	RNA binding	NOP58	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	NOP58	HDA		Human	PMID:22681889
Molecular Function	GO:0030515	snoRNA binding	NOP58	IDA		Human	PMID:17636026
Molecular Function	GO:0001094	TFIID-class transcription factor complex binding	NOP58	IPI	UniProtKB:Q16594	Human	PMID:17636026
Cellular Component	GO:0031428	box C/D RNP complex	NOP58	IDA		Human	PMID:33367824
Cellular Component	GO:0015030	Cajal body	NOP58	IDA		Human	PMID:16687569
Cellular Component	GO:0005829	cytosol	NOP58	IDA		Human	GO_REF:0000052
Cellular Component	GO:0001650	fibrillar center	NOP58	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	NOP58	HDA		Human	PMID:19946888
Cellular Component	GO:0005730	nucleolus	NOP58	IDA		Human	PMID:16687569
Cellular Component	GO:0005730	nucleolus	NOP58	IDA		Human	PMID:33367824
Cellular Component	GO:0005654	nucleoplasm	NOP58	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Nop58	IDA		Rat	PMID:10679015|RGD:633515
Cellular Component	GO:0070761	pre-snoRNP complex	NOP58	IDA		Human	PMID:17636026
Cellular Component	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	NOP58	IDA		Human	PMID:17636026
Biological Process	GO:0048254	snoRNA localization	NOP58	IMP		Human	PMID:17636026

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern