Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NOTO
  • Mouse genes Noto
  • Rat genes Noto
  • Zfish genes noto
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Noto

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:O14770-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:O60548	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:O75593	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:O76011	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:O95817	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:P0C264	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:P0CB47	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:P20290-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:P41238	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:P61978-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q12837	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q13111	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q3LI64	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q3SYF9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q53HC9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q5SW96	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q5W5X9-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q6L8G9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q6ZN32	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q7Z4F1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q8IVS8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q8IZU0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q8N9N5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q8WWB5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q96HB5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q96LK0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q96PC2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q9H2Z4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:Q9Y5V3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NOTO	IPI	UniProtKB:X5D778	Human	PMID:32296183
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	NOTO	IDA		Human	PMID:28473536
Biological Process	GO:0030325	adrenal gland development	noto	IMP	ZFIN:ZDB-GENO-070530-1	Zfish	PMID:12668625
Biological Process	GO:0048319	axial mesoderm morphogenesis	noto	IMP	ZFIN:ZDB-MRPHLNO-110304-4	Zfish	PMID:21172337
Biological Process	GO:0048319	axial mesoderm morphogenesis	noto	IGI	ZFIN:ZDB-MRPHLNO-050228-2,ZFIN:ZDB-MRPHLNO-060321-4,ZFIN:ZDB-MRPHLNO-110304-2,ZFIN:ZDB-MRPHLNO-110304-4	Zfish	PMID:21172337
Biological Process	GO:0048331	axial mesoderm structural organization	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:8575325
Biological Process	GO:0048327	axial mesodermal cell fate specification	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:8575325
Biological Process	GO:0061371	determination of heart left/right asymmetry	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:8660880
Biological Process	GO:0003140	determination of left/right asymmetry in lateral mesoderm	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:12702646
Biological Process	GO:0007368	determination of left/right symmetry	Noto	IMP	MGI:MGI:3053092	Mouse	PMID:22357932
Biological Process	GO:0007368	determination of left/right symmetry	Noto	IMP	MGI:MGI:3053092	Mouse	PMID:17884984
Biological Process	GO:0007368	determination of left/right symmetry	Noto	IMP		Mouse	PMID:20350929
Biological Process	GO:0007368	determination of left/right symmetry	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:9334285
Biological Process	GO:0048066	developmental pigmentation	noto	IMP	ZFIN:ZDB-GENO-980202-1252	Zfish	PMID:9007256
Biological Process	GO:0048066	developmental pigmentation	noto	IMP	ZFIN:ZDB-GENO-980202-898	Zfish	PMID:9007256
Biological Process	GO:0009953	dorsal/ventral pattern formation	Noto	IMP	MGI:MGI:1857063	Mouse	PMID:8155581
Biological Process	GO:0035050	embryonic heart tube development	noto	IMP	ZFIN:ZDB-GENO-070227-1	Zfish	PMID:12397116
Biological Process	GO:0003143	embryonic heart tube morphogenesis	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:9334285
Biological Process	GO:0009880	embryonic pattern specification	Noto	IMP	MGI:MGI:1857063	Mouse	PMID:15550757
Biological Process	GO:0003160	endocardium morphogenesis	noto	IMP	ZFIN:ZDB-GENO-070530-1	Zfish	PMID:22119054
Biological Process	GO:0033504	floor plate development	noto	IMP	ZFIN:ZDB-GENO-980202-898	Zfish	PMID:9007233
Biological Process	GO:0021508	floor plate formation	noto	IGI	ZFIN:ZDB-GENO-070131-2	Zfish	PMID:9053309
Biological Process	GO:0032835	glomerulus development	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:10885753
Biological Process	GO:0001947	heart looping	Noto	IMP	MGI:MGI:3053092	Mouse	PMID:17884984
Biological Process	GO:0001947	heart looping	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:9334285
Biological Process	GO:0044458	motile cilium assembly	Noto	IGI	MGI:MGI:1347474	Mouse	PMID:22357932
Biological Process	GO:0060034	notochord cell differentiation	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:8681803
Biological Process	GO:0030903	notochord development	Noto	IMP	MGI:MGI:3053092	Mouse	PMID:15231714
Biological Process	GO:0030903	notochord development	Noto	IMP	MGI:MGI:1857063	Mouse	PMID:8155581
Biological Process	GO:0030903	notochord development	Noto	IMP	MGI:MGI:3053092	Mouse	PMID:17884984
Biological Process	GO:0030903	notochord development	Noto	IMP	MGI:MGI:1857063	Mouse	PMID:15550757
Biological Process	GO:0030903	notochord development	Noto	IMP	MGI:MGI:1857063	Mouse	PMID:13837681
Biological Process	GO:0030903	notochord development	Noto	IMP		Mouse	PMID:20197654
Biological Process	GO:0030903	notochord development	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:8575325
Biological Process	GO:0014028	notochord formation	noto	IMP	ZFIN:ZDB-GENO-980202-898	Zfish	PMID:9007233
Biological Process	GO:0014028	notochord formation	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:9334285
Biological Process	GO:0021982	pineal gland development	noto	IMP	ZFIN:ZDB-GENO-070530-1	Zfish	PMID:11753388
Biological Process	GO:0021982	pineal gland development	noto	IMP	ZFIN:ZDB-GENO-070530-1	Zfish	PMID:18629869
Biological Process	GO:0021982	pineal gland development	noto	IGI	ZFIN:ZDB-GENO-161014-12,ZFIN:ZDB-MRPHLNO-051012-1	Zfish	PMID:27317804
Biological Process	GO:0021982	pineal gland development	noto	IMP	ZFIN:ZDB-GENO-161014-12	Zfish	PMID:27317804
Biological Process	GO:0035775	pronephric glomerulus morphogenesis	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:10885753
Biological Process	GO:2000223	regulation of BMP signaling pathway involved in heart jogging	noto	IMP	ZFIN:ZDB-GENO-980202-204	Zfish	PMID:9334285
Biological Process	GO:1902017	regulation of cilium assembly	Noto	IMP	MGI:MGI:3053092	Mouse	PMID:17884984
Biological Process	GO:0098528	skeletal muscle fiber differentiation	noto	IMP	ZFIN:ZDB-GENO-070530-1	Zfish	PMID:32345657
Biological Process	GO:0061053	somite development	noto	IMP	ZFIN:ZDB-GENO-980202-898	Zfish	PMID:9007233
Biological Process	GO:0001757	somite specification	noto	IMP	ZFIN:ZDB-GENO-070530-1	Zfish	PMID:32345657

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern