Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NREP
  • Mouse genes Nrep
  • Rat genes Nrep
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nrep

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NREP	IPI	UniProtKB:P56537	Human	PMID:22365962
Molecular Function	GO:0005515	protein binding	Nrep	IPI	PR:P04202	Mouse	PMID:14985127
Molecular Function	GO:0005515	protein binding	Nrep	IPI	PR:P27090	Mouse	PMID:14985127
Cellular Component	GO:0005737	cytoplasm	Nrep	IDA		Rat	PMID:15485502|RGD:1540387
Cellular Component	GO:0005634	nucleus	Nrep	IDA		Rat	PMID:15485502|RGD:1540387
Biological Process	GO:0031103	axon regeneration	Nrep	IEP		Rat	PMID:15485502|RGD:1540387
Biological Process	GO:0045664	regulation of neuron differentiation	Nrep	IMP		Rat	PMID:15485502|RGD:1540387
Biological Process	GO:0017015	regulation of transforming growth factor beta receptor signaling pathway	Nrep	IDA		Mouse	PMID:14985127

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern