Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NSMF
  • Mouse genes Nsmf
  • Rat genes Nsmf
  • Zfish genes nsmfa,nsmfb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nsmf

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0048306	calcium-dependent protein binding	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Molecular Function	GO:0005515	protein binding	Nsmf	IPI	UniProtKB:O88751-1	Mouse	MGI:MGI:5917343|PMID:18303947
Molecular Function	GO:0005515	protein binding	Nsmf	IPI	UniProtKB:O88751	Rat	PMID:18303947|RGD:8553324
Molecular Function	GO:0005515	protein binding	Nsmf	IPI	UniProtKB:O88751-1	Rat	PMID:18303947|RGD:8553324
Molecular Function	GO:0005515	protein binding	Nsmf	IPI	UniProtKB:P83953	Rat	PMID:18303947|RGD:8553324
Molecular Function	GO:0005515	protein binding	Nsmf	IPI	UniProtKB:P23565	Rat	PMID:23452857|RGD:8554744
Molecular Function	GO:0005515	protein binding	Nsmf	IPI	UniProtKB:P27361	Rat	PMID:23452857|RGD:8554744
Cellular Component	GO:0097440	apical dendrite	Nsmf	IDA		Rat	PMID:21364755|RGD:8554501
Cellular Component	GO:0030863	cortical cytoskeleton	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0005737	cytoplasm	NSMF	IDA		Human	PMID:20025934
Cellular Component	GO:0005737	cytoplasm	Nsmf	IDA		Mouse	MGI:MGI:5444444|PMID:20025934
Cellular Component	GO:0030425	dendrite	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0030425	dendrite	Nsmf	IDA		Rat	PMID:19608740|RGD:8553347
Cellular Component	GO:0043197	dendritic spine	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0000791	euchromatin	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0098978	glutamatergic synapse	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0098978	glutamatergic synapse	Nsmf	IDA		Rat	PMID:23452857|RGD:8554744
Cellular Component	GO:0098978	glutamatergic synapse	Nsmf	IMP		Rat	PMID:23452857|RGD:8554744
Cellular Component	GO:0016020	membrane	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0043005	neuron projection	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0005635	nuclear envelope	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0016363	nuclear matrix	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0031965	nuclear membrane	Nsmf	IDA		Rat	PMID:21364755|RGD:8554501
Cellular Component	GO:0005654	nucleoplasm	NSMF	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	NSMF	IDA		Human	PMID:20025934
Cellular Component	GO:0005634	nucleus	Nsmf	IDA		Mouse	MGI:MGI:5444444|PMID:20025934
Cellular Component	GO:0005634	nucleus	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0005634	nucleus	Nsmf	IDA		Rat	PMID:19608740|RGD:8553347
Cellular Component	GO:0005634	nucleus	Nsmf	IDA		Rat	PMID:21364755|RGD:8554501
Cellular Component	GO:0043204	perikaryon	Nsmf	IDA		Rat	PMID:21364755|RGD:8554501
Cellular Component	GO:0098794	postsynapse	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0014069	postsynaptic density	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Cellular Component	GO:0045202	synapse	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Biological Process	GO:0071230	cellular response to amino acid stimulus	Nsmf	IDA		Rat	PMID:18303947|RGD:8553324
Biological Process	GO:0071257	cellular response to electrical stimulus	Nsmf	IDA		Rat	PMID:21364755|RGD:8554501
Biological Process	GO:0071371	cellular response to gonadotropin stimulus	Nsmf	IDA		Mouse	MGI:MGI:5444444|PMID:20025934
Biological Process	GO:0045773	positive regulation of axon extension	nsmfb	IMP		Zfish	PMID:19097186|ZFIN:ZDB-PUB-090106-4
Biological Process	GO:2001224	positive regulation of neuron migration	NSMF	IMP		Human	PMID:20025934
Biological Process	GO:2001224	positive regulation of neuron migration	nsmfb	IMP		Zfish	PMID:19097186|ZFIN:ZDB-PUB-090106-4
Biological Process	GO:0035307	positive regulation of protein dephosphorylation	Nsmf	IMP		Rat	PMID:18303947|RGD:8553324
Biological Process	GO:0099527	postsynapse to nucleus signaling pathway	Nsmf	IMP		Rat	PMID:18303947|RGD:8553324
Biological Process	GO:0099527	postsynapse to nucleus signaling pathway	Nsmf	IDA		Rat	PMID:23452857|RGD:8554744
Biological Process	GO:0099527	postsynapse to nucleus signaling pathway	Nsmf	IMP		Rat	PMID:23452857|RGD:8554744
Biological Process	GO:0048814	regulation of dendrite morphogenesis	Nsmf	IMP		Rat	PMID:18303947|RGD:8553324
Biological Process	GO:0043523	regulation of neuron apoptotic process	Nsmf	IMP		Rat	PMID:18303947|RGD:8553324
Biological Process	GO:0048168	regulation of neuronal synaptic plasticity	Nsmf	IMP		Rat	PMID:18303947|RGD:8553324

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern