Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NUFIP1
  • Mouse genes Nufip1
  • Rat genes Nufip1
  • Zfish genes nufip1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nufip1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051117	ATPase binding	NUFIP1	IPI	UniProtKB:P60122	Human	PMID:17636026
Molecular Function	GO:0051117	ATPase binding	NUFIP1	IPI	UniProtKB:Q9WTM5	Human	PMID:17636026
Molecular Function	GO:0042802	identical protein binding	NUFIP1	IPI	UniProtKB:Q9UHK0	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:Q06787	Human	PMID:10556305
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:O60563	Human	PMID:15107825
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:P38398	Human	PMID:15107825
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:P50750	Human	PMID:15107825
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:O00567	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:P22087	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:P55769	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:P60122	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:Q9NWK9	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:Q9Y2X3	Human	PMID:17636026
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:Q15649	Human	PMID:25170085
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:P60122	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:Q15649	Human	PMID:28335020
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:Q15649	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	NUFIP1	IPI	UniProtKB:Q15649	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Nufip1	IPI	UniProtKB:Q06787	Mouse	MGI:MGI:1350464|PMID:10556305
Molecular Function	GO:0030674	protein-macromolecule adaptor activity	NUFIP1	IPI	UniProtKB:O00567	Human	PMID:17636026
Molecular Function	GO:0030674	protein-macromolecule adaptor activity	NUFIP1	IPI	UniProtKB:P55769	Human	PMID:17636026
Molecular Function	GO:0030674	protein-macromolecule adaptor activity	NUFIP1	IPI	UniProtKB:Q9Y2X3	Human	PMID:17636026
Molecular Function	GO:0003723	RNA binding	NUFIP1	IDA		Human	PMID:10556305
Molecular Function	GO:0003723	RNA binding	Nufip1	IDA		Mouse	PMID:10556305
Molecular Function	GO:0030515	snoRNA binding	NUFIP1	IDA		Human	PMID:17636026
Cellular Component	GO:0001650	fibrillar center	NUFIP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016363	nuclear matrix	NUFIP1	IDA		Human	PMID:12941608
Cellular Component	GO:0005730	nucleolus	NUFIP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	NUFIP1	IDA		Human	PMID:12941608
Cellular Component	GO:0005654	nucleoplasm	NUFIP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Nufip1	IDA		Mouse	PMID:10556305
Cellular Component	GO:0005726	perichromatin fibrils	NUFIP1	IDA		Human	PMID:12941608
Cellular Component	GO:0070761	pre-snoRNP complex	NUFIP1	IDA		Human	PMID:17636026
Cellular Component	GO:0048786	presynaptic active zone	Nufip1	IDA		Rat	PMID:12941608|RGD:13432353
Cellular Component	GO:0032991	protein-containing complex	NUFIP1	IDA		Human	PMID:17636026
Cellular Component	GO:0045202	synapse	Nufip1	IEP		Mouse	PMID:12941608
Cellular Component	GO:0045202	synapse	Nufip1	IDA		Mouse	PMID:12941608
Cellular Component	GO:0008023	transcription elongation factor complex	NUFIP1	IDA		Human	PMID:15107825
Biological Process	GO:0000492	box C/D snoRNP assembly	NUFIP1	IMP		Human	PMID:17636026
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	NUFIP1	IMP		Human	PMID:15107825

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern