Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NUP153
  • Mouse genes Nup153
  • Rat genes Nup153
  • Zfish genes nup153
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nup153

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Nup153	IDA		Rat	PMID:10362555|RGD:10401210
Molecular Function	GO:0003690	double-stranded DNA binding	Nup153	IDA		Rat	PMID:8422679|RGD:729043
Molecular Function	GO:0042802	identical protein binding	NUP153	IPI	UniProtKB:P49790	Human	PMID:23238392
Molecular Function	GO:0008139	nuclear localization sequence binding	Nup153	IDA		Rat	PMID:7878057|RGD:729014
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:Q9HAV4	Human	PMID:11777942
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:Q9HC62	Human	PMID:11896061
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:P12270	Human	PMID:12802065
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:P29323	Human	PMID:17255949
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:Q16539-3	Human	PMID:17255949
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:P70168	Human	PMID:18845677
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:P12270	Human	PMID:20133940
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:Q14974	Human	PMID:21858095
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:O60318	Human	PMID:23652018
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:Q14974	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:Q14974	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	NUP153	IPI	UniProtKB:Q93009	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	Nup153	IPI	UniProtKB:Q6P1F4	Mouse	PMID:10891500
Molecular Function	GO:0005515	protein binding	Nup153	IPI	RGD:2909	Rat	PMID:11266456|RGD:9831195
Molecular Function	GO:0005515	protein binding	Nup153	IPI	RGD:1348006	Rat	PMID:18611384|RGD:10401193
Molecular Function	GO:0005515	protein binding	Nup153	IPI	UniProtKB:P62826	Rat	PMID:18611384|RGD:10401193
Molecular Function	GO:0005515	protein binding	Nup153	IPI	RGD:2909	Rat	PMID:9531546|RGD:10401199
Molecular Function	GO:0043495	protein-membrane adaptor activity	NUP153	IMP		Human	PMID:12802065
Molecular Function	GO:0043495	protein-membrane adaptor activity	NUP153	IMP		Human	PMID:15229283
Molecular Function	GO:0031267	small GTPase binding	Nup153	IPI	RGD:620367	Rat	PMID:19505478|RGD:4145659
Molecular Function	GO:0017056	structural constituent of nuclear pore	NUP153	IMP		Human	PMID:15229283
Molecular Function	GO:0017056	structural constituent of nuclear pore	NUP153	IDA		Human	PMID:22253824
Molecular Function	GO:0008270	zinc ion binding	Nup153	IDA		Rat	PMID:19505478|RGD:4145659
Cellular Component	GO:0005642	annulate lamellae	Nup153	IDA		Rat	PMID:8832404|RGD:10401217
Cellular Component	GO:0005829	cytosol	NUP153	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	NUP153	IMP		Human	PMID:26051542
Cellular Component	GO:0005635	nuclear envelope	NUP153	IDA		Human	PMID:24315095
Cellular Component	GO:0042405	nuclear inclusion body	NUP153	IDA		Human	PMID:11839768
Cellular Component	GO:0042405	nuclear inclusion body	Nup153	IDA		Rat	PMID:11839768|RGD:8553300
Cellular Component	GO:0031965	nuclear membrane	NUP153	IDA		Human	GO_REF:0000052
Cellular Component	GO:0031965	nuclear membrane	NUP153	IDA		Human	PMID:11839768
Cellular Component	GO:0031965	nuclear membrane	NUP153	IDA		Human	PMID:12802065
Cellular Component	GO:0031965	nuclear membrane	NUP153	IDA		Human	PMID:15229283
Cellular Component	GO:0031965	nuclear membrane	NUP153	IDA		Human	PMID:20407419
Cellular Component	GO:0031965	nuclear membrane	Nup153	IDA		Rat	PMID:11839768|RGD:8553300
Cellular Component	GO:0034399	nuclear periphery	NUP153	IDA		Human	PMID:11839768
Cellular Component	GO:0034399	nuclear periphery	NUP153	IDA		Human	PMID:15229283
Cellular Component	GO:0034399	nuclear periphery	Nup153	IDA		Rat	PMID:11839768|RGD:8553300
Cellular Component	GO:0005643	nuclear pore	NUP153	IDA		Human	PMID:12802065
Cellular Component	GO:0005643	nuclear pore	NUP153	IDA		Human	PMID:15229283
Cellular Component	GO:0005643	nuclear pore	Nup153	IDA		Rat	PMID:15703211|RGD:7327145
Cellular Component	GO:0044615	nuclear pore nuclear basket	NUP153	IDA		Human	PMID:11839768
Cellular Component	GO:0044615	nuclear pore nuclear basket	Nup153	IDA		Rat	PMID:11839768|RGD:8553300
Cellular Component	GO:0005730	nucleolus	NUP153	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	NUP153	IDA		Human	GO_REF:0000052
Cellular Component	GO:1990875	nucleoplasmic side of nuclear pore	Nup153	IDA		Rat	PMID:8422679|RGD:729043
Cellular Component	GO:0032991	protein-containing complex	Nup153	IDA		Rat	PMID:19505478|RGD:4145659
Biological Process	GO:0001525	angiogenesis	nup153	IMP	ZFIN:ZDB-MRPHLNO-151209-5	Zfish	PMID:26221075
Biological Process	GO:0001525	angiogenesis	nup153	IMP	ZFIN:ZDB-MRPHLNO-151209-4	Zfish	PMID:26221075
Biological Process	GO:0000278	mitotic cell cycle	Nup153	IDA		Rat	PMID:10362555|RGD:10401210
Biological Process	GO:0046832	negative regulation of RNA export from nucleus	NUP153	IDA		Human	PMID:22253824
Biological Process	GO:0051292	nuclear pore complex assembly	NUP153	IMP		Human	PMID:12802065
Biological Process	GO:0051292	nuclear pore complex assembly	NUP153	IMP		Human	PMID:15229283

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern