Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NUP43
  • Mouse genes Nup43
  • Rat genes Nup43
  • Zfish genes nup43
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nup43

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:P52948	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:P57740	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:Q12769	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:Q8NFH4	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:Q8WUM0	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:Q9BW27	Human	PMID:15146057
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:O75400-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:P02766	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:P06307	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:P07686	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:P13473-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:P54252	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:P55212	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:Q13148	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	NUP43	IPI	UniProtKB:Q99497	Human	PMID:32814053
Cellular Component	GO:0005829	cytosol	NUP43	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000776	kinetochore	NUP43	IDA		Human	PMID:15146057
Cellular Component	GO:0005635	nuclear envelope	NUP43	IDA		Human	PMID:24315095
Cellular Component	GO:0031080	nuclear pore outer ring	NUP43	IDA		Human	PMID:17360435
Cellular Component	GO:0016607	nuclear speck	NUP43	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	NUP43	IDA		Human	GO_REF:0000052
Biological Process	GO:0007507	heart development	nup43	IMP	ZFIN:ZDB-MRPHLNO-170927-3	Zfish	PMID:28611029
Biological Process	GO:0007507	heart development	nup43	IMP	ZFIN:ZDB-MRPHLNO-170927-4	Zfish	PMID:28611029

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern