Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NXT1
  • Mouse genes Nxt1
  • Rat genes Nxt1
  • Zfish genes nxt2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nxt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9H1B4	Human	PMID:11566096
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9UBU9	Human	PMID:11583626
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9BP41	Human	PMID:12483225
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:A0A0B4K7J2,UniProtKB:M9PBD9,UniProtKB:Q9U1H9	Human	PMID:14729961
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:P46060,UniProtKB:P49792,UniProtKB:Q9UBU9	Human	PMID:14729961
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9H4D5	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9UBU9	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q82506	Human	PMID:17267598
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9H4D5	Human	PMID:19060904
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9UBU9	Human	PMID:23299939
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:O95793	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q6ZW49-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9H4D5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9UBU9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9UBU9	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9H4D5	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:O95793	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q8IX29	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	NXT1	IPI	UniProtKB:Q9H4D5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Nxt1	IPI	PR:Q99JX7	Mouse	PMID:11579093
Molecular Function	GO:0005515	protein binding	Nxt1	IPI	MGI:MGI:2685230	Mouse	PMID:15820316
Molecular Function	GO:0005515	protein binding	Nxt1	IPI	MGI:MGI:1933192	Mouse	PMID:15820316
Molecular Function	GO:0005515	protein binding	Nxt1	IPI	PR:Q99JX7	Mouse	PMID:15820316
Molecular Function	GO:0031267	small GTPase binding	Nxt1	IDA		Mouse	PMID:10567585
Cellular Component	GO:0005829	cytosol	NXT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005643	nuclear pore	Nxt1	IDA		Mouse	PMID:11579093
Cellular Component	GO:0042272	nuclear RNA export factor complex	NXT1	IPI		Human	PMID:25628361
Cellular Component	GO:0005654	nucleoplasm	NXT1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	NXT1	IDA		Human	PMID:25628361
Biological Process	GO:0007507	heart development	nxt2	IMP	ZFIN:ZDB-GENO-051003-1	Zfish	PMID:15790397
Biological Process	GO:0007507	heart development	nxt2	IMP	ZFIN:ZDB-MRPHLNO-050521-1	Zfish	PMID:15790397
Biological Process	GO:0006406	mRNA export from nucleus	NXT1	IDA		Human	PMID:25628361
Biological Process	GO:0051028	mRNA transport	nxt2	IGI	ZFIN:ZDB-GENE-030131-2585	Zfish	PMID:25605961
Biological Process	GO:0006611	protein export from nucleus	Nxt1	IDA		Mouse	PMID:10567585
Biological Process	GO:0006405	RNA export from nucleus	Nxt1	IDA		Mouse	PMID:11579093

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern