Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes NXT2
  • Mouse genes Nxt2
  • Rat genes Nxt2
  • Zfish genes nxt2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Nxt2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:Q9H4D5	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:Q9H4D5	Human	PMID:21516116
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:P26045	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:P36406	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:Q04864	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:Q08379	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:Q68D86	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:Q70EL1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:Q8TBB1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:Q96MT8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:Q9BWW4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:Q9H4D5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:V9HWB8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	NXT2	IPI	UniProtKB:Q9H4D5	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	Nxt2	IPI	UniProtKB:P35922	Mouse	MGI:MGI:5770077|PMID:16790844
Molecular Function	GO:0005515	protein binding	Nxt2	IPI	MGI:MGI:1933192	Mouse	PMID:15820316
Molecular Function	GO:0005515	protein binding	Nxt2	IPI	PR:Q99JX7	Mouse	PMID:15820316
Molecular Function	GO:0005515	protein binding	Nxt2	IPI	MGI:MGI:2685230	Mouse	PMID:15820316
Cellular Component	GO:0005737	cytoplasm	Nxt2	IDA		Mouse	MGI:MGI:5770077|PMID:16790844
Cellular Component	GO:0005829	cytosol	NXT2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0042272	nuclear RNA export factor complex	NXT2	IPI		Human	PMID:25416956
Cellular Component	GO:0042272	nuclear RNA export factor complex	NXT2	IPI		Human	PMID:32296183
Cellular Component	GO:0005654	nucleoplasm	NXT2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Nxt2	IDA		Mouse	MGI:MGI:5770077|PMID:16790844
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Nxt2	IDA		Mouse	MGI:MGI:5770077|PMID:16790844
Biological Process	GO:0007507	heart development	nxt2	IMP	ZFIN:ZDB-GENO-051003-1	Zfish	PMID:15790397
Biological Process	GO:0007507	heart development	nxt2	IMP	ZFIN:ZDB-MRPHLNO-050521-1	Zfish	PMID:15790397
Biological Process	GO:0051028	mRNA transport	nxt2	IGI	ZFIN:ZDB-GENE-030131-2585	Zfish	PMID:25605961

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern