Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes OASL
  • Mouse genes Oasl1
  • Rat genes Oasl
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Oasl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	OASL	IDA		Human	PMID:9826176
Molecular Function	GO:0003725	double-stranded RNA binding	OASL	IDA		Human	PMID:25925578
Molecular Function	GO:0003725	double-stranded RNA binding	OASL	IDA		Human	PMID:9826176
Molecular Function	GO:0003725	double-stranded RNA binding	Oasl1	IDA		Mouse	PMID:12396720
Molecular Function	GO:0005515	protein binding	OASL	IPI	UniProtKB:Q4G0J3	Human	PMID:30833792
Molecular Function	GO:0003723	RNA binding	OASL	HDA		Human	PMID:22658674
Cellular Component	GO:0005737	cytoplasm	OASL	IDA		Human	PMID:9826176
Cellular Component	GO:0005829	cytosol	OASL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	OASL	HDA		Human	PMID:19946888
Cellular Component	GO:0005730	nucleolus	OASL	IDA		Human	PMID:9826176
Cellular Component	GO:0005654	nucleoplasm	OASL	IDA		Human	GO_REF:0000052
Biological Process	GO:0051607	defense response to virus	OASL	IDA		Human	PMID:21478870
Biological Process	GO:0070106	interleukin-27-mediated signaling pathway	OASL	IEP		Human	PMID:32270034
Biological Process	GO:0070106	interleukin-27-mediated signaling pathway	Oasl1	IEP		Mouse	MGI:MGI:6415954|PMID:32270034
Biological Process	GO:0045071	negative regulation of viral genome replication	OASL	IDA		Human	PMID:18931074
Biological Process	GO:0045071	negative regulation of viral genome replication	OASL	IDA		Human	PMID:20074559
Biological Process	GO:1900246	positive regulation of RIG-I signaling pathway	OASL	IDA		Human	PMID:25925578
Biological Process	GO:0009615	response to virus	OASL	IDA		Human	PMID:18931074
Biological Process	GO:0009615	response to virus	OASL	IDA		Human	PMID:20074559

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern