Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes OBI1
  • Mouse genes Obi1
  • Rat genes Obi1
  • Zfish genes obi1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Obi1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	OBI1	IDA		Human	PMID:31160578
Molecular Function	GO:0005515	protein binding	OBI1	IPI	UniProtKB:Q8N8B7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	OBI1	IPI	UniProtKB:O43913,UniProtKB:Q9UBD5	Human	PMID:31160578
Molecular Function	GO:0005515	protein binding	OBI1	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0004842	ubiquitin-protein transferase activity	OBI1	IDA		Human	PMID:31160578
Cellular Component	GO:0000785	chromatin	OBI1	IDA		Human	PMID:31160578
Biological Process	GO:0048026	positive regulation of mRNA splicing, via spliceosome	Obi1	IMP		Mouse	PMID:23636947
Biological Process	GO:0051865	protein autoubiquitination	OBI1	IDA		Human	PMID:31160578
Biological Process	GO:0006513	protein monoubiquitination	OBI1	IDA		Human	PMID:31160578
Biological Process	GO:0006275	regulation of DNA replication	OBI1	IDA		Human	PMID:31160578

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern