Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes OCM,OCM2
  • Mouse genes Ocm
  • Rat genes Ocm
  • Zfish genes pvalb8,pvalb9
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ocm

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005509	calcium ion binding	Ocm	IDA		Rat	PMID:15323551|RGD:7175524
Molecular Function	GO:0005509	calcium ion binding	Ocm	IDA		Rat	PMID:19651438|RGD:7175522
Molecular Function	GO:0005509	calcium ion binding	Ocm	IDA		Rat	PMID:2231727|RGD:12793042
Molecular Function	GO:0005509	calcium ion binding	Ocm	IDA		Rat	PMID:8487302|RGD:12793021
Molecular Function	GO:0042802	identical protein binding	Ocm	IPI	RGD:3222	Rat	PMID:15323551|RGD:7175524
Molecular Function	GO:0043167	ion binding	Ocm	EXP		Rat	PMID:17766386|RGD:152995579
Molecular Function	GO:0005515	protein binding	OCM	IPI	UniProtKB:O00560	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OCM	IPI	UniProtKB:P12532	Human	PMID:32296183
Molecular Function	GO:0042803	protein homodimerization activity	Ocm	IDA		Rat	PMID:2231727|RGD:12793042
Molecular Function	GO:0042803	protein homodimerization activity	Ocm	IDA		Rat	PMID:8487302|RGD:12793021
Molecular Function	GO:0044877	protein-containing complex binding	Ocm	IDA		Rat	PMID:15323551|RGD:7175524
Cellular Component	GO:0032437	cuticular plate	Ocm	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0005737	cytoplasm	Ocm	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0005615	extracellular space	Ocm	IDA		Rat	PMID:16699509|RGD:12793002
Cellular Component	GO:0005634	nucleus	Ocm	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0032991	protein-containing complex	Ocm	IDA		Rat	PMID:15323551|RGD:7175524
Cellular Component	GO:0032420	stereocilium	Ocm	IDA		Rat	PMID:16120789|RGD:7175527
Cellular Component	GO:0099512	supramolecular fiber	Ocm	IDA		Rat	PMID:16699509|RGD:12793002
Cellular Component	GO:0031982	vesicle	Ocm	IDA		Rat	PMID:16699509|RGD:12793002
Biological Process	GO:0090102	cochlea development	Ocm	IEP		Rat	PMID:16120789|RGD:7175527
Biological Process	GO:0048691	positive regulation of axon extension involved in regeneration	Ocm	IDA		Rat	PMID:16699509|RGD:12793002
Biological Process	GO:1905593	positive regulation of optical nerve axon regeneration	Ocm	IDA		Rat	PMID:16699509|RGD:12793002
Biological Process	GO:1902336	positive regulation of retinal ganglion cell axon guidance	Ocm	IDA		Rat	PMID:16699509|RGD:12793002
Biological Process	GO:0009611	response to wounding	Ocm	IDA		Rat	PMID:16699509|RGD:12793002
Biological Process	GO:0051238	sequestering of metal ion	Ocm	EXP		Rat	PMID:17766386|RGD:152995579

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern