Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes OOEP
  • Mouse genes Ooep
  • Rat genes Ooep
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ooep

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:P59047	Human	PMID:25542835
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:Q587J8	Human	PMID:25542835
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:Q9H808-1	Human	PMID:25542835
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:Q587J8,UniProtKB:Q9H808	Human	PMID:26537248
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:P09917	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:P14678-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:Q17RB8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:Q8N8B7-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:Q9H0I2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:Q9HAQ2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:Q9NX04	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OOEP	IPI	UniProtKB:Q9NYB9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Ooep	IPI	UniProtKB:Q66X05|UniProtKB:Q9WVB3	Mouse	MGI:MGI:6389592|PMID:31575650
Molecular Function	GO:0005515	protein binding	Ooep	IPI	UniProtKB:Q9R1M5,UniProtKB:Q9WVB3	Mouse	MGI:MGI:6467696|PMID:28992324
Molecular Function	GO:0005515	protein binding	Ooep	IPI	UniProtKB:O88700|UniProtKB:Q61510|UniProtKB:Q9CWU5	Mouse	MGI:MGI:6467697|PMID:29125140
Molecular Function	GO:0005515	protein binding	Ooep	IPI	PR:Q9R1M5	Mouse	PMID:18804437
Molecular Function	GO:0005515	protein binding	Ooep	IPI	PR:Q66X22	Mouse	PMID:32413845
Molecular Function	GO:0005515	protein binding	Ooep	IPI	PR:Q9WVB3	Mouse	PMID:18804437
Molecular Function	GO:0003723	RNA binding	Ooep	IDA		Mouse	PMID:18191828
Cellular Component	GO:0045177	apical part of cell	Ooep	IDA		Mouse	PMID:18191828
Cellular Component	GO:0005938	cell cortex	Ooep	IDA		Mouse	MGI:MGI:6296386|PMID:25208553
Cellular Component	GO:0005938	cell cortex	Ooep	IDA		Mouse	PMID:19376971
Cellular Component	GO:0005938	cell cortex	Ooep	IDA		Mouse	PMID:18804437
Cellular Component	GO:0005938	cell cortex	Ooep	IDA		Mouse	PMID:18191828
Cellular Component	GO:0005737	cytoplasm	OOEP	IDA		Human	PMID:25542835
Cellular Component	GO:0005634	nucleus	OOEP	IDA		Human	PMID:25542835
Cellular Component	GO:0005634	nucleus	Ooep	IDA		Mouse	MGI:MGI:6467697|PMID:29125140
Cellular Component	GO:0032991	protein-containing complex	OOEP	IDA		Human	PMID:26537248
Cellular Component	GO:0032991	protein-containing complex	Ooep	IDA		Mouse	PMID:18804437
Cellular Component	GO:0106333	subcortical maternal complex	OOEP	IDA		Human	PMID:25542835
Cellular Component	GO:0106333	subcortical maternal complex	OOEP	IDA		Human	PMID:26537248
Cellular Component	GO:0106333	subcortical maternal complex	Ooep	IDA		Mouse	MGI:MGI:3811945|PMID:18804437
Cellular Component	GO:0106333	subcortical maternal complex	Ooep	IDA		Mouse	MGI:MGI:6467696|PMID:28992324
Cellular Component	GO:0106333	subcortical maternal complex	Ooep	IDA		Mouse	MGI:MGI:6389592|PMID:31575650
Biological Process	GO:0007015	actin filament organization	Ooep	IMP		Mouse	MGI:MGI:6296386|PMID:25208553
Biological Process	GO:0007566	embryo implantation	Ooep	IMP	MGI:MGI:3812181	Mouse	PMID:18804437
Biological Process	GO:0009880	embryonic pattern specification	Ooep	IDA		Mouse	PMID:18191828
Biological Process	GO:0051293	establishment of spindle localization	Ooep	IMP		Mouse	MGI:MGI:6296386|PMID:25208553
Biological Process	GO:0035088	establishment or maintenance of apical/basal cell polarity	Ooep	IDA		Mouse	PMID:18191828
Biological Process	GO:0009566	fertilization	Ooep	IMP	MGI:MGI:3812181	Mouse	PMID:18804437
Biological Process	GO:0001701	in utero embryonic development	Ooep	IMP	MGI:MGI:3812181	Mouse	PMID:18804437
Biological Process	GO:2000781	positive regulation of double-strand break repair	Ooep	IMP		Mouse	MGI:MGI:6467697|PMID:29125140
Biological Process	GO:1905168	positive regulation of double-strand break repair via homologous recombination	Ooep	IMP		Mouse	MGI:MGI:6272426|PMID:29955025
Biological Process	GO:0045836	positive regulation of meiotic nuclear division	Ooep	IMP		Mouse	MGI:MGI:6272426|PMID:29955025
Biological Process	GO:0006468	protein phosphorylation	Ooep	IDA		Mouse	PMID:18191828
Biological Process	GO:0065003	protein-containing complex assembly	Ooep	IMP	MGI:MGI:3812181	Mouse	PMID:18804437
Biological Process	GO:0051302	regulation of cell division	Ooep	IMP		Mouse	MGI:MGI:6296386|PMID:25208553
Biological Process	GO:0070201	regulation of establishment of protein localization	Ooep	IMP		Mouse	MGI:MGI:6272426|PMID:29955025
Biological Process	GO:0032880	regulation of protein localization	Ooep	IMP		Mouse	MGI:MGI:6467697|PMID:29125140
Biological Process	GO:0031297	replication fork processing	Ooep	IMP		Mouse	MGI:MGI:6467697|PMID:29125140

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern