Comparative GO Graph (mouse, human, rat, zebrafish)

Source

Alliance of Genome Resources

Compare experimental GO annotations for Human-Mouse-Rat-Zebrafish orthologs to Mouse Otub1

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

This class contains
- Human genes OTUB1
- Mouse genes Otub1
- Rat genes Otub1
- Zfish genes otub1a,otub1b
Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Otub1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	OTUB1	IDA		Human	PMID:18954305
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	OTUB1	IDA		Human	PMID:19211026
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	OTUB1	IDA		Human	PMID:23827681
Molecular Function	GO:0019784	deNEDDylase activity	OTUB1	IDA		Human	PMID:18954305
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q9RI12	Human	PMID:16364312
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P35637	Human	PMID:18954305
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P63244	Human	PMID:18954305
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P51668	Human	PMID:19549727
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P51965	Human	PMID:19549727
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P61077	Human	PMID:19549727
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P62837	Human	PMID:19549727
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P62837	Human	PMID:19615732
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q56921	Human	PMID:20553488
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P02766	Human	PMID:21900206
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P04637	Human	PMID:22124327
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P51668	Human	PMID:22124327
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P61077	Human	PMID:22124327
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P62837	Human	PMID:22124327
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q00987	Human	PMID:22124327
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q13490	Human	PMID:23524849
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P61077	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q9Y2X8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P22314	Human	PMID:26752685
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P51668	Human	PMID:26752685
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P51965	Human	PMID:26752685
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P61077	Human	PMID:26752685
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P62837	Human	PMID:26752685
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q13148	Human	PMID:26752685
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q969T4	Human	PMID:26752685
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q96LR5	Human	PMID:26752685
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q99497	Human	PMID:26752685
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q9NWT6	Human	PMID:26752685
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P62837	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q969T4	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q96LR5	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q9NWT6	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q9Y2X8	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P51668	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P61077	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P62837	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q969T4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q96LR5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q9Y2X8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:G5E9A7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:O14645	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:O14773	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:O14901	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:O43464	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:O60260-5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:O60333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:O75190-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P00441	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P01023	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P02766	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P04792	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P07686	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P0CG47	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P14136	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P19404	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P22314	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P28799	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P35240-4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P35637	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P37840	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P40337-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P46379-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P49768-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P50570-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P51608	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:P60891	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q13148	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q14203-5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q53GS7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q7Z699	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q86WV8	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q8WUW1	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q8WXH2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q99497	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q9UMF0	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q9Y3C5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	OTUB1	IPI	UniProtKB:Q8N6M0	Human	PMID:33421002
Molecular Function	GO:0043130	ubiquitin binding	OTUB1	IDA		Human	PMID:19211026
Molecular Function	GO:0031625	ubiquitin protein ligase binding	OTUB1	IPI	UniProtKB:P61088	Human	PMID:20725033
Cellular Component	GO:0005737	cytoplasm	Otub1	IDA		Rat	PMID:22279542\|RGD:7175260
Cellular Component	GO:0070062	extracellular exosome	OTUB1	HDA		Human	PMID:19056867
Cellular Component	GO:0070062	extracellular exosome	OTUB1	HDA		Human	PMID:23533145
Cellular Component	GO:0005634	nucleus	Otub1	IDA		Rat	PMID:22279542\|RGD:7175260
Biological Process	GO:0071347	cellular response to interleukin-1	Otub1	IEP		Rat	PMID:22279542\|RGD:7175260
Biological Process	GO:0006974	DNA damage response	OTUB1	IDA		Human	PMID:20725033
Biological Process	GO:2000780	negative regulation of double-strand break repair	OTUB1	IMP		Human	PMID:20725033
Biological Process	GO:1901315	negative regulation of histone H2A K63-linked ubiquitination	OTUB1	IDA		Human	PMID:20725033
Biological Process	GO:0071108	protein K48-linked deubiquitination	OTUB1	IDA		Human	PMID:18954305
Biological Process	GO:0071108	protein K48-linked deubiquitination	OTUB1	IDA		Human	PMID:19211026
Biological Process	GO:0071108	protein K48-linked deubiquitination	OTUB1	IDA		Human	PMID:23827681

Gene Ontology Evidence Code Abbreviations:

EXP Inferred from experiment

IDA Inferred from direct assay

IEP Inferred from expression pattern

IGI Inferred from genetic interaction

IMP Inferred from mutant phenotype

IPI Inferred from physical interaction

HTP Inferred from High Throughput Experiment

HDA Inferred from High Throughput Direct Assay

HMP Inferred from High Throughput Mutant Phenotype

HGI Inferred from High Throughput Genetic Interaction

HEP Inferred from High Throughput Expression Pattern

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023. Complete table of the annotations represented in this image is provided below.

Molecular Function

Cellular Component

Biological Process

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.