Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes P3H1
  • Mouse genes P3h1
  • Rat genes P3h1
  • Zfish genes p3h1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set P3h1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0005604	basement membrane	P3h1	IDA		Rat	PMID:10455179|RGD:633221
Cellular Component	GO:0062023	collagen-containing extracellular matrix	P3H1	HDA		Human	PMID:28327460
Cellular Component	GO:0005783	endoplasmic reticulum	P3H1	IDA		Human	PMID:19846465
Cellular Component	GO:0005783	endoplasmic reticulum	P3H1	IDA		Human	PMID:20089953
Cellular Component	GO:0070062	extracellular exosome	P3H1	HDA		Human	PMID:19056867
Cellular Component	GO:0016020	membrane	P3H1	HDA		Human	PMID:19946888
Biological Process	GO:0060348	bone development	P3H1	IMP		Human	PMID:17277775
Biological Process	GO:0060348	bone development	P3H1	IMP		Human	PMID:22615817
Biological Process	GO:0030199	collagen fibril organization	P3h1	IMP	MGI:MGI:4830452	Mouse	PMID:20363744
Biological Process	GO:0030308	negative regulation of cell growth	P3h1	IDA		Mouse	PMID:10951563
Biological Process	GO:1901874	negative regulation of post-translational protein modification	P3H1	IMP		Human	PMID:17277775
Biological Process	GO:1901874	negative regulation of post-translational protein modification	P3H1	IMP		Human	PMID:22615817
Biological Process	GO:0010976	positive regulation of neuron projection development	P3h1	IDA		Rat	PMID:23825416|RGD:8655547
Biological Process	GO:0006457	protein folding	P3H1	IMP		Human	PMID:17277775
Biological Process	GO:0018126	protein hydroxylation	P3H1	IMP		Human	PMID:17277775
Biological Process	GO:0050821	protein stabilization	P3H1	IMP		Human	PMID:19846465
Biological Process	GO:0050821	protein stabilization	P3H1	IMP		Human	PMID:22615817
Biological Process	GO:0030278	regulation of ossification	P3h1	IMP	MGI:MGI:4830452	Mouse	PMID:20363744
Biological Process	GO:0050708	regulation of protein secretion	P3H1	IMP		Human	PMID:17277775

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern