Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PABPC1,PABPC3
  • Mouse genes Pabpc1
  • Rat genes Pabpc1
  • Zfish genes pabpc1a,pabpc1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pabpc1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003730	mRNA 3'-UTR binding	PABPC1	IDA		Human	PMID:16126846
Molecular Function	GO:0003729	mRNA binding	PABPC1	EXP		Human	PMID:23041282
Molecular Function	GO:0003729	mRNA binding	Pabpc1	IDA		Rat	PMID:11416190|RGD:633375
Molecular Function	GO:0008143	poly(A) binding	PABPC1	IDA		Human	PMID:16804161
Molecular Function	GO:0008143	poly(A) binding	PABPC1	IDA		Human	PMID:21984414
Molecular Function	GO:0008143	poly(A) binding	PABPC3	IDA		Human	PMID:11328870
Molecular Function	GO:0008266	poly(U) RNA binding	PABPC1	IDA		Human	PMID:21984414
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9H074	Human	PMID:11051545
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9BPZ3	Human	PMID:11172725
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9H074	Human	PMID:11997512
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q04637	Human	PMID:12086624
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P15170	Human	PMID:12489690
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q8IYD1	Human	PMID:14685257
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9BPZ3	Human	PMID:14685257
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9H074	Human	PMID:14685257
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9J0X9	Human	PMID:15567442
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q99700	Human	PMID:15663938
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q96Q15	Human	PMID:16452507
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q14103-4	Human	PMID:16556936
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9BPZ3	Human	PMID:16601676
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q04637	Human	PMID:16772376
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9ULR5	Human	PMID:16804161
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9NZI8	Human	PMID:17289661
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q99700	Human	PMID:17392519
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q58A45	Human	PMID:17595167
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9UKV8	Human	PMID:17932509
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9UL18	Human	PMID:17932509
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q8IYD1	Human	PMID:18447585
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:O00571	Human	PMID:18596238
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q7Z333	Human	PMID:19515850
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q04637	Human	PMID:19716330
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9HCJ0	Human	PMID:19716330
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9HCJ0	Human	PMID:20098421
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q99700	Human	PMID:20181956
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9HCJ0	Human	PMID:20181956
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P19338	Human	PMID:20221403
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P26651	Human	PMID:20221403
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P15170-2	Human	PMID:20418951
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q6PKG0	Human	PMID:20430826
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P22893	Human	PMID:20595389
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P50616	Human	PMID:20595394
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q6Y7W6	Human	PMID:20696395
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q8NDV7	Human	PMID:21063388
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9HCJ0	Human	PMID:21063388
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9UPQ9	Human	PMID:21063388
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q71RC2	Human	PMID:21098120
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:O00571	Human	PMID:21883093
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9HCJ0	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9UPQ9	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:O00571	Human	PMID:22872150
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q2Q1W2	Human	PMID:23125361
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q13283	Human	PMID:23279204
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9UN86	Human	PMID:23279204
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q14106	Human	PMID:23340509
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q58A45	Human	PMID:23340509
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q8IYD1	Human	PMID:23340509
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9HCJ0	Human	PMID:23340509
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P06730	Human	PMID:23665581
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q09161	Human	PMID:23665581
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q86U42	Human	PMID:23665581
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P35568	Human	PMID:23770097
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P17844	Human	PMID:23788676
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9H074	Human	PMID:24396066
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q6PKG0	Human	PMID:24532714
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P19712:PRO_0000038050	Human	PMID:24965446
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q92900	Human	PMID:25220460
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9Y446	Human	PMID:25225333
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9NUL5	Human	PMID:26735137
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q8N8Q3	Human	PMID:27573237
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:O60293	Human	PMID:27871484
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:O00571	Human	PMID:28733330
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q8NDV7	Human	PMID:28877994
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q5VWP2	Human	PMID:28931820
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P14240	Human	PMID:29261807
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P05067	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q99700-5	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q09161	Human	PMID:32960270
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9H074	Human	PMID:33876849
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:P50616	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q14106	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q8IYD1	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q99700	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9BPZ3	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9H074	Human	PMID:35044719
Molecular Function	GO:0005515	protein binding	PABPC1	IPI	UniProtKB:Q9BPZ3	Human	PMID:35511136
Molecular Function	GO:0005515	protein binding	PABPC3	IPI	UniProtKB:Q8NEK8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PABPC3	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PABPC3	IPI	UniProtKB:Q8WXH2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Pabpc1	IPI	PR:Q640Q5	Mouse	PMID:18625844
Molecular Function	GO:0005515	protein binding	Pabpc1	IPI	PR:Q91YI6	Mouse	PMID:17927953
Molecular Function	GO:0005515	protein binding	Pabpc1	IPI	UniProtKB:P35570	Rat	PMID:23770097|RGD:8554563
Molecular Function	GO:0005515	protein binding	pabpc1a	IPI	UniProtKB:B5DE31	Zfish	PMID:31399345|ZFIN:ZDB-PUB-190811-3
Molecular Function	GO:0003723	RNA binding	PABPC1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	PABPC1	HDA		Human	PMID:22681889
Molecular Function	GO:0003723	RNA binding	PABPC1	IPI	RNAcentral:URS000080E35F_32630	Human	PMID:23041282
Molecular Function	GO:0003723	RNA binding	PABPC1	IDA		Human	PMID:25225333
Cellular Component	GO:0071013	catalytic step 2 spliceosome	PABPC1	IDA		Human	PMID:11991638
Cellular Component	GO:0031252	cell leading edge	PABPC1	IDA		Human	PMID:28733330
Cellular Component	GO:0005737	cytoplasm	PABPC1	IDA		Human	PMID:28733330
Cellular Component	GO:0005737	cytoplasm	Pabpc1	IDA		Mouse	PMID:18625844
Cellular Component	GO:0036464	cytoplasmic ribonucleoprotein granule	PABPC1	IDA		Human	PMID:15121898
Cellular Component	GO:0010494	cytoplasmic stress granule	PABPC1	IDA		Human	PMID:21883093
Cellular Component	GO:0010494	cytoplasmic stress granule	PABPC1	IDA		Human	PMID:21940797
Cellular Component	GO:0005829	cytosol	PABPC1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	PABPC1	IDA		Human	PMID:11051545
Cellular Component	GO:0005829	cytosol	PABPC3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030425	dendrite	Pabpc1	IDA		Rat	PMID:20596529|RGD:10043155
Cellular Component	GO:0070062	extracellular exosome	PABPC1	HDA		Human	PMID:23533145
Cellular Component	GO:0070062	extracellular exosome	PABPC3	HDA		Human	PMID:23533145
Cellular Component	GO:0005925	focal adhesion	PABPC1	HDA		Human	PMID:21423176
Cellular Component	GO:0106002	mCRD-mediated mRNA stability complex	PABPC1	IPI		Human	PMID:11051545
Cellular Component	GO:0016020	membrane	PABPC1	HDA		Human	PMID:19946888
Cellular Component	GO:1990124	messenger ribonucleoprotein complex	Pabpc1	IDA		Rat	PMID:20596529|RGD:10043155
Cellular Component	GO:0005634	nucleus	PABPC1	IDA		Human	PMID:21940797
Cellular Component	GO:1990904	ribonucleoprotein complex	PABPC1	IDA		Human	PMID:17289661
Cellular Component	GO:0045202	synapse	Pabpc1	EXP		Mouse	PMID:16452087
Cellular Component	GO:0045202	synapse	Pabpc1	IDA		Mouse	PMID:16452087
Cellular Component	GO:0045202	synapse	Pabpc1	EXP		Mouse	PMID:28252024
Cellular Component	GO:0045202	synapse	Pabpc1	IDA		Mouse	PMID:28252024
Biological Process	GO:0070934	CRD-mediated mRNA stabilization	PABPC1	IDA		Human	PMID:11051545
Biological Process	GO:0007507	heart development	pabpc1a	IMP	ZFIN:ZDB-GENO-040929-4	Zfish	PMID:19652097
Biological Process	GO:1900152	negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	PABPC1	IDA		Human	PMID:11051545
Biological Process	GO:2000623	negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	PABPC1	IDA		Human	PMID:18447585
Biological Process	GO:2000767	positive regulation of cytoplasmic translation	PABPC1	IDA		Human	PMID:11051545
Biological Process	GO:1900153	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	Pabpc1	IMP		Mouse	MGI:MGI:5486537|PMID:19716330
Biological Process	GO:0060213	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	Pabpc1	IMP		Mouse	MGI:MGI:5486537|PMID:19716330
Biological Process	GO:0045070	positive regulation of viral genome replication	PABPC1	IMP		Human	PMID:26735137
Biological Process	GO:0031047	RNA-mediated gene silencing	Pabpc1	IMP		Mouse	MGI:MGI:5486537|PMID:19716330

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern