Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PABPC1L
  • Mouse genes Pabpc1l
  • Rat genes Pabpc1l
  • Zfish genes pabpc1l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pabpc1l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	pabpc1l	IPI	ZFIN:ZDB-GENE-030818-1	Zfish	PMID:27913641
Cellular Component	GO:0070062	extracellular exosome	PABPC1L	HDA		Human	PMID:23533145
Cellular Component	GO:0032991	protein-containing complex	pabpc1l	IPI	ZFIN:ZDB-GENE-030818-1	Zfish	PMID:27913641
Biological Process	GO:0006338	chromatin remodeling	Pabpc1l	IDA		Mouse	PMID:26134869
Biological Process	GO:0006338	chromatin remodeling	Pabpc1l	IMP	MGI:MGI:5437740	Mouse	PMID:26134869
Biological Process	GO:0006378	mRNA polyadenylation	Pabpc1l	IMP	MGI:MGI:5437740	Mouse	PMID:22621333
Biological Process	GO:0051647	nucleus localization	Pabpc1l	IMP	MGI:MGI:5437740	Mouse	PMID:26134869
Biological Process	GO:0001556	oocyte maturation	Pabpc1l	IDA		Mouse	PMID:26134869
Biological Process	GO:0001556	oocyte maturation	Pabpc1l	IMP	MGI:MGI:5437740	Mouse	PMID:22621333
Biological Process	GO:0045815	transcription initiation-coupled chromatin remodeling	Pabpc1l	IMP	MGI:MGI:5437740	Mouse	PMID:26134869

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern