Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PABPC4
  • Mouse genes Pabpc4
  • Rat genes Pabpc4
  • Zfish genes pabpc4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pabpc4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003729	mRNA binding	Pabpc4	IDA		Mouse	PMID:24469397
Molecular Function	GO:0008143	poly(A) binding	PABPC4	IDA		Human	PMID:8524242
Molecular Function	GO:0008266	poly(U) RNA binding	PABPC4	IDA		Human	PMID:8524242
Molecular Function	GO:0005515	protein binding	PABPC4	IPI	UniProtKB:Q8WV24	Human	PMID:11369516
Molecular Function	GO:0005515	protein binding	PABPC4	IPI	UniProtKB:O60293	Human	PMID:27871484
Molecular Function	GO:0003723	RNA binding	PABPC4	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	PABPC4	HDA		Human	PMID:22681889
Cellular Component	GO:0005737	cytoplasm	PABPC4	IDA		Human	PMID:21940797
Cellular Component	GO:0005737	cytoplasm	PABPC4	IDA		Human	PMID:8524242
Cellular Component	GO:0010494	cytoplasmic stress granule	PABPC4	IDA		Human	PMID:21940797
Cellular Component	GO:0005829	cytosol	PABPC4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	PABPC4	IDA		Human	PMID:21940797
Cellular Component	GO:1990904	ribonucleoprotein complex	PABPC4	IDA		Human	PMID:17289661
Biological Process	GO:0061515	myeloid cell development	Pabpc4	IMP		Mouse	PMID:24469397
Biological Process	GO:0043488	regulation of mRNA stability	Pabpc4	IMP		Mouse	PMID:24469397

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern