Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PADI3
  • Mouse genes Padi3
  • Rat genes Padi3
  • Zfish genes padi2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Padi3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140794	histone arginine deiminase activity	padi2	IMP	ZFIN:ZDB-GENO-210506-12	Zfish	PMID:32328635
Molecular Function	GO:0042802	identical protein binding	PADI3	IPI	UniProtKB:Q9ULW8	Human	PMID:25416956
Molecular Function	GO:0042802	identical protein binding	PADI3	IPI	UniProtKB:Q9ULW8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PADI3	IPI	UniProtKB:Q04864-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PADI3	IPI	UniProtKB:Q0VD86	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	PADI3	IPI	UniProtKB:O14645	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PADI3	IPI	UniProtKB:O14901	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PADI3	IPI	UniProtKB:P24539	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PADI3	IPI	UniProtKB:P27361	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	PADI3	IPI	UniProtKB:Q9BVL2	Human	PMID:32814053
Molecular Function	GO:0004668	protein-arginine deiminase activity	PADI3	IMP		Human	PMID:27866708
Molecular Function	GO:0004668	protein-arginine deiminase activity	Padi3	IDA		Rat	PMID:12392711|RGD:8554540
Molecular Function	GO:0004668	protein-arginine deiminase activity	Padi3	IDA		Rat	PMID:9192727|RGD:69926
Cellular Component	GO:0005737	cytoplasm	PADI3	IDA		Human	PMID:27866708
Cellular Component	GO:0005829	cytosol	PADI3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	PADI3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	PADI3	IDA		Human	GO_REF:0000052
Biological Process	GO:0001944	vasculature development	padi2	IMP	ZFIN:ZDB-MRPHLNO-170818-2	Zfish	PMID:28617813
Biological Process	GO:0001944	vasculature development	padi2	IMP	ZFIN:ZDB-MRPHLNO-170818-1	Zfish	PMID:28617813

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern