Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PAM16
  • Mouse genes Pam16l
  • Rat genes Magmas-ps1,Pam16
  • Zfish genes pam16
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pam16l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	PAM16	IPI	UniProtKB:Q96DA6	Human	PMID:19564938
Molecular Function	GO:0005515	protein binding	PAM16	IPI	UniProtKB:Q96DA6	Human	PMID:20053669
Molecular Function	GO:0005515	protein binding	PAM16	IPI	UniProtKB:Q9Y5T4	Human	PMID:23263864
Molecular Function	GO:0005515	protein binding	PAM16	IPI	UniProtKB:Q15041	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	PAM16	IPI	UniProtKB:Q6FHY5	Human	PMID:32296183
Cellular Component	GO:0099617	matrix side of mitochondrial inner membrane	PAM16	IDA		Human	PMID:20053669
Cellular Component	GO:0005759	mitochondrial matrix	PAM16	IDA		Human	PMID:20053669
Cellular Component	GO:0001405	PAM complex, Tim23 associated import motor	PAM16	IGI	SGD:S000003640	Human	PMID:20053669
Cellular Component	GO:0032991	protein-containing complex	PAM16	IDA		Human	PMID:19564938
Cellular Component	GO:0032991	protein-containing complex	PAM16	IDA		Human	PMID:20053669
Biological Process	GO:1902511	negative regulation of apoptotic DNA fragmentation	Pam16	IDA		Rat	PMID:24069394|RGD:13462066
Biological Process	GO:0043066	negative regulation of apoptotic process	Pam16	IDA		Rat	PMID:24069394|RGD:13462066
Biological Process	GO:0032780	negative regulation of ATP-dependent activity	PAM16	IDA		Human	PMID:19564938
Biological Process	GO:0032780	negative regulation of ATP-dependent activity	PAM16	IDA		Human	PMID:20053669
Biological Process	GO:0090201	negative regulation of release of cytochrome c from mitochondria	Pam16	IDA		Rat	PMID:24069394|RGD:13462066
Biological Process	GO:0001503	ossification	PAM16	IMP		Human	PMID:24786642
Biological Process	GO:0030150	protein import into mitochondrial matrix	PAM16	IGI	SGD:S000003640	Human	PMID:20053669

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern