Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes PAN3
  • Mouse genes Pan3
  • Rat genes Pan3
  • Zfish genes pan3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Pan3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004535	poly(A)-specific ribonuclease activity	PAN3	IDA		Human	PMID:14583602
Molecular Function	GO:0005515	protein binding	PAN3	IPI	UniProtKB:Q504Q3	Human	PMID:14583602
Molecular Function	GO:0005515	protein binding	PAN3	IPI	UniProtKB:P11940	Human	PMID:17595167
Molecular Function	GO:0005515	protein binding	PAN3	IPI	UniProtKB:Q504Q3	Human	PMID:19615732
Molecular Function	GO:0005515	protein binding	PAN3	IPI	UniProtKB:Q8NDV7	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	PAN3	IPI	UniProtKB:Q9HCJ0	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	PAN3	IPI	UniProtKB:Q9UPQ9	Human	PMID:21981923
Molecular Function	GO:0005515	protein binding	PAN3	IPI	UniProtKB:P11940	Human	PMID:23340509
Molecular Function	GO:0005515	protein binding	Pan3	IPI	PR:Q8BGF7	Mouse	PMID:18625844
Molecular Function	GO:0005515	protein binding	Pan3	IPI	PR:P29341	Mouse	PMID:18625844
Molecular Function	GO:0005515	protein binding	Pan3	IPI	PR:O35710	Mouse	PMID:18625844
Cellular Component	GO:0000932	P-body	Pan3	IDA		Mouse	PMID:18625844
Cellular Component	GO:0031251	PAN complex	PAN3	IDA		Human	PMID:14583602
Biological Process	GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	Pan3	IMP		Mouse	PMID:18625844
Biological Process	GO:0010606	positive regulation of cytoplasmic mRNA processing body assembly	Pan3	IMP		Mouse	PMID:18625844
Biological Process	GO:0010606	positive regulation of cytoplasmic mRNA processing body assembly	Pan3	IDA		Mouse	PMID:18625844
Biological Process	GO:0006605	protein targeting	Pan3	IDA		Mouse	PMID:18625844

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern